DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and KCO3

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001190480.1 Gene:KCO3 / 834679 AraportID:AT5G46360 Length:260 Species:Arabidopsis thaliana


Alignment Length:76 Identity:20/76 - (26%)
Similarity:31/76 - (40%) Gaps:29/76 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 DDDSMYGDEYGDYGDLLPKDRPVPIWL-------CVFLVVSYILGGAVLFAYWENWSFLDSAYFC 654
            |.|:.|            :..||.:.|       |.||:|.:::          ...:|||..|.
plant    90 DSDNAY------------QTHPVAVALYFFVVTFCGFLIVHFVV----------KIGWLDSFCFS 132

  Fly   655 FITLTTIGFGD 665
            .:.:||:||||
plant   133 VMMVTTVGFGD 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921 15/52 (29%)
Ion_trans_2 626..706 CDD:285168 13/40 (33%)
KCO3NP_001190480.1 Ion_trans_2 104..176 CDD:285168 15/50 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.