DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and kcnk1a

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001092223.1 Gene:kcnk1a / 793480 ZFINID:ZDB-GENE-070620-26 Length:338 Species:Danio rerio


Alignment Length:167 Identity:48/167 - (28%)
Similarity:85/167 - (50%) Gaps:28/167 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVSK 106
            ::|||..|.|.:.||.:|..:|.|:|.:::::::.::....|:...||:|               
Zfish    24 LVLVLAYVLYLIFGALVFSAVELPYEEQLRQELRTVKQQFLEDNECLSND--------------- 73

  Fly   107 HLANFEKQILTAIKADGWDGDEDLRKS----QWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTT 167
               ..|:.::.|::|..: |...|..:    .|.|..:||::..|::|.||||..|.:|.||...
Zfish    74 ---RLEEFLIKALEASNY-GVSVLNNASSNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFC 134

  Fly   168 IFYAIVGIPLMLICLSNIGD-VMATSFR----FLYWR 199
            |.|::||||..|:.|:.:.. :|..|.|    ||:.|
Zfish   135 IIYSVVGIPFTLLFLTAVVQRIMEFSTRRPIEFLHRR 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 26/78 (33%)
Ion_trans_2 626..706 CDD:462301
kcnk1aNP_001092223.1 Ion_trans_2 <99..158 CDD:462301 22/58 (38%)
Ion_trans_2 191..267 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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