DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk16

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001102990.1 Gene:Kcnk16 / 688996 RGDID:1582911 Length:292 Species:Rattus norvegicus


Alignment Length:169 Identity:52/169 - (30%)
Similarity:86/169 - (50%) Gaps:27/169 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PQRGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTE 83
            |:.|.|   .|:..:||..:::::..:||       ||.:||.||:..|.:.:...|..::...|
  Rat     2 PRAGVC---SCWGGQVLPLLLAYICYLLL-------GATIFQRLEKQAEAQSRDQFQLEKLRFLE 56

  Fly    84 NIWLLSDDAVVLRESDWMANVSKHLANFEKQILTA-IKADGWDGDEDLRKSQWTFAGSLFYSIIV 147
            |...|...|               |..|.:.||.| :|.....|: ....|.|.|..|.|::..|
  Rat    57 NYTCLDQQA---------------LEQFVQVILEAWVKGVNPKGN-STNPSNWDFGSSFFFAGTV 105

  Fly   148 ITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIG 186
            :||||||:::|.|:.|:|..:|||::||||.::.|:::|
  Rat   106 VTTIGYGNLAPSTEAGQVFCVFYALMGIPLNVVFLNHLG 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 30/73 (41%)
Ion_trans_2 626..706 CDD:462301
Kcnk16NP_001102990.1 Ion_trans_2 87..145 CDD:462301 25/58 (43%)
Ion_trans_2 180..248 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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