DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk10

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_075584.1 Gene:Kcnk10 / 65272 RGDID:619732 Length:538 Species:Rattus norvegicus


Alignment Length:170 Identity:52/170 - (30%)
Similarity:79/170 - (46%) Gaps:36/170 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLR 96
            ||.:      |.:.::||.|.|.|..:|:.||:|.|...|                   :.:.|.
  Rat    69 WKTV------VAIFVVVVVYLVTGGLVFRALEQPFESSQK-------------------NTIALE 108

  Fly    97 ESDWMANVSKHLA----NFEKQILTAIKADGWD----GDEDLRKSQWTFAGSLFYSIIVITTIGY 153
            :::::.:   |:.    ..|..|..|:.||...    |:.....|.|....:.|::..|||||||
  Rat   109 KAEFLRD---HICVSPQELETLIQHALDADNAGVSPVGNSSNSSSHWDLGSAFFFAGTVITTIGY 170

  Fly   154 GHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSF 193
            |:|:|.|:.||:..|.|||.||||....|:.|||.:.|.|
  Rat   171 GNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIF 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 27/54 (50%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
Kcnk10NP_075584.1 Ion_trans_2 148..206 CDD:400301 28/57 (49%)
Ion_trans_2 244..323 CDD:400301
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..444
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9664
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11003
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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