DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and kcnk10b

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_005169840.1 Gene:kcnk10b / 565629 ZFINID:ZDB-GENE-050420-31 Length:575 Species:Danio rerio


Alignment Length:594 Identity:132/594 - (22%)
Similarity:214/594 - (36%) Gaps:167/594 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WKVLTCIVSHVLLVLLVV-SYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVL 95
            ||.       ||.|.:|| ||.|.|...||.||:|.| .:::|      ::|:.      .|..|
Zfish    94 WKT-------VLAVFVVVLSYLVCGGLAFQALEQPFE-SIQKD------SITQK------KAQFL 138

  Fly    96 RESDWMANVSKHLANFEKQILTAIKADGWD----GDEDLRKSQWTFAGSLFYSIIVITTIGYGHI 156
            :::..:::     |:.|..|..|::|....    ||.....|||....:.|::..||||||||:|
Zfish   139 QKNPCVSH-----ADLEALIKHAVEAVSTGVSPIGDASYNSSQWDLGSAFFFAGTVITTIGYGNI 198

  Fly   157 SPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRNARSRQRS 221
            :|.|:.||:..|.|||.||||....|:.:||.:.|.|            .::..|......::..
Zfish   199 APSTEGGKIFCILYAIFGIPLFGFLLAGVGDQLGTMF------------MKSILRVEKVFRQKHK 251

  Fly   222 MRSQRHAR----------------SQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPD------ 264
            ..||...|                :.|...|:.:                  ..:|..|      
Zfish   252 QISQTKIRVTSTILFIIAGCIVFVTIPAVFFKHT------------------EGWSTLDAIYFVV 298

  Fly   265 --LRTMGRGYDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTI-YGDGYETQTLNRSN---RYS 323
              |.|:|       .|...:||.|.....:    .:.|.....| .|..|....|:...   |..
Zfish   299 ITLTTIG-------IGDYVAGGDRKIEYMK----WYKPLVWFWILVGLAYFAAVLSMIGDWLRVL 352

  Fly   324 SRQRQRDRMRD-----RHTVERERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKA 383
            |::.:.:..:.     .|.||.:...|:.|........|::....:|||::||:      |..:.
Zfish   353 SKKTKEEVGQQVGGIKAHAVEWKANVRAELRETRRRLSGEIHDKLQRAATIRSM------ERRRL 411

  Fly   384 SRELHRLHSAPGRSRAK-----SVDP-RHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAA 442
            ..| .|.||....|..|     |:|. |..:|..|.:|..:        |...|....|.::.::
Zfish   412 GLE-QRAHSLDMLSPEKRAVFASLDAGRFKTSSQESIDTKL--------NNLRLKAKCGEQQTSS 467

  Fly   443 P-----RSQSMPRSAHQRQRQKDRERERSPQPPPQSSYRQQHDRRAGSLGRQSSRYGNHLELPDY 502
            .     |..|:.:.| :|.|.||..|.....|                           .::.:.
Zfish   468 EENIFNRFGSLTKLA-KRNRSKDLRRNIQEDP---------------------------TQIDEL 504

  Fly   503 DAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGSLYGDNNYEDYPPERHH------SRSREPKRNR 561
            |....|.:.:.:   ..:.:.|:..||..::.:..|......||.|...      ::.:|.:||:
Zfish   505 DNVTLGEERQEE---EDEDQMEEEEEEKVEKQANTGFTCLPHYPEEPKQQNGLAPAQVKEQERNK 566

  Fly   562 RRERAERLP 570
            |.|..|..|
Zfish   567 RLELKEHQP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 27/54 (50%)
NESP55 341..586 CDD:115071 49/247 (20%)
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
kcnk10bXP_005169840.1 Ion_trans_2 172..231 CDD:285168 28/58 (48%)
Ion_trans_2 271..350 CDD:285168 16/107 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9562
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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