DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk6

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001028697.2 Gene:Kcnk6 / 52150 MGIID:1891291 Length:313 Species:Mus musculus


Alignment Length:141 Identity:43/141 - (30%)
Similarity:70/141 - (49%) Gaps:26/141 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQI 115
            |...||.|...||||||..::.::..||..|             |:.|..:|  :..|..|.:::
Mouse    17 YLALGALLVARLERPHEARLRAELGTLREQL-------------LQHSPCVA--AHALDAFVERV 66

  Fly   116 LTA--------IKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYAI 172
            |.|        ..|.|.....|   ..|.||.:||::..::||:|||:.:|.||.||..:|.:|:
Mouse    67 LAAGRLGRAALANASGAANASD---PAWDFASALFFASTLVTTVGYGYTTPLTDAGKAFSIVFAL 128

  Fly   173 VGIPLMLICLS 183
            :|:|:.::.|:
Mouse   129 LGVPITMLLLT 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 20/50 (40%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
Kcnk6NP_001028697.2 Ion_trans_2 <91..146 CDD:285168 20/49 (41%)
Ion_trans <171..253 CDD:278921
Ion_trans_2 180..259 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10523
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 130 1.000 Inparanoid score I4619
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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