DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk18

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001003820.1 Gene:Kcnk18 / 445371 RGDID:1303091 Length:405 Species:Rattus norvegicus


Alignment Length:700 Identity:123/700 - (17%)
Similarity:194/700 - (27%) Gaps:360/700 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLE-RP-----HELEVKRDIQN---- 76
            |:.:..:||    |.|:|::.|:          ||.||..:| ||     ...|:|:.:..    
  Rat    40 GKLLPGLCF----LCCLVTYALV----------GAALFSAVEGRPDPEAEENPELKKFLDKLCNI 90

  Fly    77 LRVNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSL 141
            |:.|||           |:..|  ..::.:||...:.|...|        .||     |:|..:|
  Rat    91 LKCNLT-----------VVEGS--RKDLCEHLQQLKPQWFKA--------PED-----WSFLSAL 129

  Fly   142 FYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCT 206
            |:...|.:|:||||:.|.|..||...:.||:.|||||.:.|::|||::|......|.|....:|.
  Rat   130 FFCCTVFSTVGYGHMYPVTRLGKFLCMLYALFGIPLMFLVLTDIGDILAAILSRAYSRFQALLCL 194

  Fly   207 RTAKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRG 271
                 ||:....:..:..::...|:|..                                     
  Rat   195 -----PRDISKWRPLLLCRKQTDSKPAD------------------------------------- 217

  Fly   272 YDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRH 336
                                                                             
  Rat   218 ----------------------------------------------------------------- 217

  Fly   337 TVERERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKS 401
                |...:..:|||: ::..|.||                      |||               
  Rat   218 ----EAIPQIVIDAGA-DELLDPQP----------------------SRE--------------- 240

  Fly   402 VDPRHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERS 466
                                                     |.|.|.  :....:|...||::..
  Rat   241 -----------------------------------------PASPSC--NVELFERLVAREKQNE 262

  Fly   467 PQPPPQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESF 531
            .|||.                |...|..:..||                   ..||....:..:.
  Rat   263 LQPPM----------------RPVERSNSCPEL-------------------VLGRLSCSILSNL 292

  Fly   532 DEGSLYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYD 596
            ||                                                 |.:|:.|       
  Rat   293 DE-------------------------------------------------VGQQVER------- 301

  Fly   597 DDDSMYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWE-NWSFLDSAYFCFITLTT 660
                              .|.|:|:  ...::.:||...|.:..:|| :..|.|:.||||:||||
  Rat   302 ------------------LDIPLPV--IALVIFAYISCAAAILPFWETDLGFEDAFYFCFVTLTT 346

  Fly   661 IGFGDFVPAKGVKDESEQSIAYCSLYLLFGIALLAMSFNLVQEEFIANVK 710
            |||||.|..      ......:.|:|::.|:.:|.::|.|:|...:...|
  Rat   347 IGFGDIVLV------HPHFFLFFSIYIIVGMEILFIAFKLMQNRLLHTYK 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 28/73 (38%)
Ion_trans_2 626..706 CDD:462301 28/80 (35%)
Kcnk18NP_001003820.1 Ion_trans_2 116..177 CDD:462301 28/73 (38%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 138..143 3/4 (75%)
Interaction with calcineurin. /evidence=ECO:0000250|UniProtKB:Q6VV64 221..226 0/4 (0%)
Interaction with YWHAH. /evidence=ECO:0000250|UniProtKB:Q6VV64 272..277 1/4 (25%)
Ion_trans_2 308..385 CDD:462301 28/84 (33%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q7Z418 346..351 4/4 (100%)

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