DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and CG10864

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_650726.1 Gene:CG10864 / 42222 FlyBaseID:FBgn0038621 Length:389 Species:Drosophila melanogaster


Alignment Length:737 Identity:116/737 - (15%)
Similarity:177/737 - (24%) Gaps:426/737 - (57%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PAKPQRGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVN 80
            |:...|.| |...|.::....|  :.|.:..|:|.|.:.||:.|.|:||....|....:..||.|
  Fly    28 PSNQPRKR-VKRCCRNFVTFMC--TQVGVGALIVIYAICGAFAFMHIERQFVDETAGHVMELRQN 89

  Fly    81 LTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSI 145
            .::.:|.:::...::....|....:..|..::.||...:| .|:.|...  :..|:|..:|.:.:
  Fly    90 CSQQLWSITEQHNIIDRRRWTEATNDVLREYQSQIAGVVK-HGYVGRSP--EQIWSFPAALMFCL 151

  Fly   146 IVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAK 210
            .|||.||||::.|||.|||..|:.||..||||.::...|:|.|:|.||:|||             
  Fly   152 SVITMIGYGNMVPRTPWGKGFTVIYATFGIPLYILYFLNMGRVLARSFKFLY------------- 203

  Fly   211 RPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRGYDDR 275
                                       ||:                                   
  Fly   204 ---------------------------RSL----------------------------------- 206

  Fly   276 EFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTVER 340
                                  ||..|.|.                      :.|||        
  Fly   207 ----------------------HDCTQEHP----------------------RLDRM-------- 219

  Fly   341 ERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKSVDPR 405
                    ||                                       |....|.:|.|.:   
  Fly   220 --------DA---------------------------------------LEGGVGMTRKKVI--- 234

  Fly   406 HVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERSPQPP 470
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   471 PQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGS 535
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   536 LYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYDDDDS 600
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   601 MYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTIGFGD 665
                              ||...|::::..|:|.|.|:||.||.||.|:|.|||..:|..|||||
  Fly   235 ------------------VPSTACLWVIFFYVLTGTVMFANWEKWSLLNSFYFCMTSLCKIGFGD 281

  Fly   666 FVPA------------------------------KGVKDESEQSIAYCSLYLLFGIALLAMSFNL 700
            |||.                              :.|..:....:|...:|:|.|:.|:||..||
  Fly   282 FVPGASLTTSADVNAATQKLQEDISADPAELAQLQSVAADQHSKLAINFVYMLLGMGLVAMCRNL 346

  Fly   701 VQEEFIANVKEVARRLGILKDD 722
            ::||.....:|:.....:..:|
  Fly   347 MREEVRLKAREMREDAKLCMED 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 29/73 (40%)
Ion_trans_2 626..706 CDD:462301 36/109 (33%)
CG10864NP_650726.1 Ion_trans_2 <141..197 CDD:462301 26/55 (47%)
Ion_trans_2 242..>284 CDD:462301 22/41 (54%)

Return to query results.
Submit another query.