DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and CG10864

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_650726.1 Gene:CG10864 / 42222 FlyBaseID:FBgn0038621 Length:389 Species:Drosophila melanogaster


Alignment Length:737 Identity:116/737 - (15%)
Similarity:177/737 - (24%) Gaps:426/737 - (57%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PAKPQRGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVN 80
            |:...|.| |...|.::....|  :.|.:..|:|.|.:.||:.|.|:||....|....:..||.|
  Fly    28 PSNQPRKR-VKRCCRNFVTFMC--TQVGVGALIVIYAICGAFAFMHIERQFVDETAGHVMELRQN 89

  Fly    81 LTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSI 145
            .::.:|.:::...::....|....:..|..::.||...:| .|:.|...  :..|:|..:|.:.:
  Fly    90 CSQQLWSITEQHNIIDRRRWTEATNDVLREYQSQIAGVVK-HGYVGRSP--EQIWSFPAALMFCL 151

  Fly   146 IVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAK 210
            .|||.||||::.|||.|||..|:.||..||||.::...|:|.|:|.||:|||             
  Fly   152 SVITMIGYGNMVPRTPWGKGFTVIYATFGIPLYILYFLNMGRVLARSFKFLY------------- 203

  Fly   211 RPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRGYDDR 275
                                       ||:                                   
  Fly   204 ---------------------------RSL----------------------------------- 206

  Fly   276 EFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTVER 340
                                  ||..|.|.                      :.|||        
  Fly   207 ----------------------HDCTQEHP----------------------RLDRM-------- 219

  Fly   341 ERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKSVDPR 405
                    ||                                       |....|.:|.|.:   
  Fly   220 --------DA---------------------------------------LEGGVGMTRKKVI--- 234

  Fly   406 HVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERSPQPP 470
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   471 PQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGS 535
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   536 LYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYDDDDS 600
                                                                             
  Fly   235 ----------------------------------------------------------------- 234

  Fly   601 MYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTIGFGD 665
                              ||...|::::..|:|.|.|:||.||.||.|:|.|||..:|..|||||
  Fly   235 ------------------VPSTACLWVIFFYVLTGTVMFANWEKWSLLNSFYFCMTSLCKIGFGD 281

  Fly   666 FVPA------------------------------KGVKDESEQSIAYCSLYLLFGIALLAMSFNL 700
            |||.                              :.|..:....:|...:|:|.|:.|:||..||
  Fly   282 FVPGASLTTSADVNAATQKLQEDISADPAELAQLQSVAADQHSKLAINFVYMLLGMGLVAMCRNL 346

  Fly   701 VQEEFIANVKEVARRLGILKDD 722
            ::||.....:|:.....:..:|
  Fly   347 MREEVRLKAREMREDAKLCMED 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 25/54 (46%)
NESP55 341..586 CDD:115071 6/244 (2%)
Ion_trans <621..709 CDD:278921 37/117 (32%)
Ion_trans_2 626..706 CDD:285168 36/109 (33%)
CG10864NP_650726.1 Ion_trans_2 124..197 CDD:285168 30/75 (40%)
Ion_trans_2 242..>284 CDD:285168 22/41 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461317
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43430
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11003
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8678
SonicParanoid 00.000 Not matched by this tool.
76.880

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