DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and CG1688

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster


Alignment Length:954 Identity:229/954 - (24%)
Similarity:332/954 - (34%) Gaps:340/954 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AKPQRG--RCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRV 79
            |||:..  ||..      .:|..:.|...|||||:.|.|.|..||..||.|.::.....|...|.
  Fly    56 AKPRSSLRRCCG------HLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSRE 114

  Fly    80 NLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKAD---------------------- 122
            :....:|::::...||.|.:|...|.:.|..||..|:.|.:..                      
  Fly   115 DCLRELWIITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALG 179

  Fly   123 --GWD-GDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSN 184
              |:| ||    ...|:|:.:|.||:.||||||:|.::|||..||:.|||||:||:||||:|||:
  Fly   180 HFGYDAGD----SQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSS 240

  Fly   185 IGDVMATSFRFLYWRICCYV--------------CTRTAKRPRNARSRQRSMRSQRH-------- 227
            :|.::|...:..|.|:||.:              .|.:|....|:|.:....||:|.        
  Fly   241 LGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQ 305

  Fly   228 ---ARSQP--------------PPSFRRSMKMTQRSGND----SGLGPSMGHAY-------SDPD 264
               |.|:.              ||.        ::.|:.    ..|.|.. |.|       ..||
  Fly   306 YDAANSETSLNDCLEYGQKGKLPPD--------KKEGDACQLLRNLNPQQ-HFYQQQQQQPQQPD 361

  Fly   265 LRTMGRGYDDREFGHRSSGGGRNRRQQQQQHLHHD--------PRQRH----------------- 304
            :..|          ..:||....:...|||.|...        |||.|                 
  Fly   362 VMLM----------TTTSGSALLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQLQQNFVA 416

  Fly   305 ----------------------TIY---------------GDGYETQTLNRSNRYSSRQRQRDRM 332
                                  |||               ...:.||..| .|...:.......:
  Fly   417 VPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSAPGSPAHNQAHPTQNPN-GNALGNTTLGSQPL 480

  Fly   333 RDRHTVERERYSRSH--LDAG------------------SIEDFGDMQPPAKRAASVRSVR---- 373
            ...||:..:..|..|  |.:|                  ::|......|||.:.|||.:||    
  Fly   481 VKYHTIHLQPASGKHRVLASGLQDATAVNLVTASEASTSTLEAITLPPPPAYQTASVHAVRRAKF 545

  Fly   374 --SPHNQE------SSKASRELHRLH--------SAPGRSRAKS---------VDPRHVSSHYED 413
              .|..||      ....|.:|...|        .:|....|.|         ..|:..:.....
  Fly   546 VAKPLPQEINALMDCGTGSPDLSGRHDLLPPPHSGSPATGTAASPLLTYTAAATSPQLSAGIKGG 610

  Fly   414 VDEDVVRKTPIIPN-----RYALDDFG-------GNRRQAAP-----------------RSQSMP 449
            .........|::.:     ..||.|.|       |....|||                 .:.|..
  Fly   611 SGPAPTAGAPMLVSGAGRGAAALTDNGFMAAGVCGMGAAAAPLPVTSMGAATTTASSAASTLSAL 675

  Fly   450 RSAHQ------RQRQKDRERER----------------SPQPPPQSSYRQQHDRRAGSLGRQSSR 492
            .||:.      .:.:.::||||                ||...||.|         |....:::.
  Fly   676 LSANSTGNVDIMEDEDEQERERLSNCPHGTPSRVPLIASPLSVPQDS---------GENTTRNTA 731

  Fly   493 YGNH-LELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGSLYGD--NNYEDYPPERHHSRS 554
            :..| |:      |...:.....||.|...           .|:||..  ||.|....|.:....
  Fly   732 FNRHTLQ------PLSRKTLLLTRRCHRHA-----------SGTLYDSTANNTETSDDEEYMQHG 779

  Fly   555 REPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYDD------DDSMYGDEYGDYGDLL 613
            .|                            :.:.::..|..|.      :||...||..|     
  Fly   780 SE----------------------------QFVLKKLRYHCDGKDCREAEDSEEEDEKAD----- 811

  Fly   614 PKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTIGFGDFVPAKGVKDESEQ 678
              .|.|||.|.:.::.|||..|.|:||.|||||.:|.|||||:||:|||:||||||:.......|
  Fly   812 --GRQVPISLVLLILASYICVGTVIFALWENWSLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQ 874

  Fly   679 SIAYCSLYLLFGIALLAMSFNLVQEEFIANVKEVARRLGILKDD 722
            ..|.|: |||.|:.|:||||::::.:.:...|.:|.||.:.:.|
  Fly   875 LYACCA-YLLLGLVLVAMSFSILETQLMWKCKRIAVRLKLARAD 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 32/54 (59%)
NESP55 341..586 CDD:115071 59/347 (17%)
Ion_trans <621..709 CDD:278921 43/87 (49%)
Ion_trans_2 626..706 CDD:285168 41/79 (52%)
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 32/55 (58%)
Ion_trans_2 822..896 CDD:285168 41/74 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439043
Domainoid 1 1.000 51 1.000 Domainoid score I4317
eggNOG 1 0.900 - - E1_KOG1418
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I4753
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41373
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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