DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-48

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001022681.1 Gene:twk-48 / 3565640 WormBaseID:WBGene00010784 Length:372 Species:Caenorhabditis elegans


Alignment Length:707 Identity:153/707 - (21%)
Similarity:217/707 - (30%) Gaps:342/707 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QRGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTEN 84
            :|.:....:....|::....||:.|..|||.|.:.||.:|:.:|.|||.|::..:::.|....:.
 Worm     6 RRSKVTRVVNLVKKIIAFFFSHIGLCALVVGYALLGAVIFKAVEGPHEAEIQELVKSAREKAVDV 70

  Fly    85 IWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVIT 149
            :|..:.....|....|...|...:..|:...:.:|: .|:||.|..:::||||.|:..||:.|||
 Worm    71 VWNATFRVNRLDSKQWKKTVLDEVKRFKTVCMLSIR-KGYDGKEYGKQAQWTFTGAFLYSLTVIT 134

  Fly   150 TIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRN 214
            |||||:.:.:|..||..|:.|||:||||||:.|:|||||||..|||||                 
 Worm   135 TIGYGNTAAKTYIGKTLTMLYAIIGIPLMLLFLTNIGDVMAKIFRFLY----------------- 182

  Fly   215 ARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRGYDDREFGH 279
                              ..|.|...::.                                    
 Worm   183 ------------------AQSIRLKFRLI------------------------------------ 193

  Fly   280 RSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTVERERYS 344
                            |.|..|                                           
 Worm   194 ----------------LWHKKR------------------------------------------- 199

  Fly   345 RSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKSVDPRHVSS 409
                                :||.:|                           ||.|:..|....
 Worm   200 --------------------KAAKIR---------------------------RANSLVSRLTRG 217

  Fly   410 HYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERSPQPPPQSS 474
            |....|..|             |.||                                       
 Worm   218 HRVKADSSV-------------DSFG--------------------------------------- 230

  Fly   475 YRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGSLYGD 539
                       ||                   .|.|            .||.:.           
 Worm   231 -----------LG-------------------AGAD------------VEDLLT----------- 242

  Fly   540 NNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYDDDDSMYGD 604
                        :|....:...|...|.:|                             :||   
 Worm   243 ------------ARVEMEQLEVRETAAAQL-----------------------------ESM--- 263

  Fly   605 EYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTIGFGDFVPA 669
                         .|||.|.||.::.|:..|..:|..||.|:||:|.|||||:||||||||..|:
 Worm   264 -------------TVPISLVVFTMLGYLGVGTTIFKVWEGWTFLESFYFCFISLTTIGFGDKFPS 315

  Fly   670 KGVK--DESEQSIAYCSLYLLFGIALLAMSFNLVQEEFIANVKEVARRLGILKDDDD 724
            ..|.  ||:::.:...|:|||||:|||||.|||.|||.....:.:|.:....:||||
 Worm   316 TSVSNTDEAQEKLVITSIYLLFGMALLAMCFNLAQEEVQNKTRWIADKFRSKEDDDD 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 33/54 (61%)
NESP55 341..586 CDD:115071 23/244 (9%)
Ion_trans <621..709 CDD:278921 47/89 (53%)
Ion_trans_2 626..706 CDD:285168 44/81 (54%)
twk-48NP_001022681.1 Ion_trans_2 <117..176 CDD:285168 35/58 (60%)
Ion_trans_2 272..355 CDD:285168 44/82 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H99971
Inparanoid 1 1.050 243 1.000 Inparanoid score I2081
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11003
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8678
SonicParanoid 1 1.000 - - X2863
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.000

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