DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk3

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_203694.1 Gene:Kcnk3 / 29553 RGDID:61997 Length:411 Species:Rattus norvegicus


Alignment Length:190 Identity:63/190 - (33%)
Similarity:91/190 - (47%) Gaps:45/190 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSHVLLVLLVVSYCVGGAYLFQHLE-RPHELEVKR-DIQNL----RVNLTENIWLLSDDAVVLRE 97
            |..:.|::...:|.:.||.:|..|| .|..:|.:| :::.|    |.||:|..: ...:.||||.
  Rat     6 VRTLALIVCTFTYLLVGAAVFDALESEPEMIERQRLELRQLELRARYNLSEGGY-EELERVVLRL 69

  Fly    98 SDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDW 162
            ....|.|                             ||.||||.:::|.|||||||||.:|.||.
  Rat    70 KPHKAGV-----------------------------QWRFAGSFYFAITVITTIGYGHAAPSTDG 105

  Fly   163 GKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRNARSRQRSM 222
            |||..:|||::||||.|:...::|:.:.|..|:|..|         |||....|..:.||
  Rat   106 GKVFCMFYALLGIPLTLVMFQSLGERINTFVRYLLHR---------AKRGLGMRHAEVSM 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 31/73 (42%)
Ion_trans_2 626..706 CDD:462301
Kcnk3NP_203694.1 Ion_trans_2 <73..132 CDD:462301 33/87 (38%)
Ion_trans_2 167..243 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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