DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and twk-10

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001300134.1 Gene:twk-10 / 192080 WormBaseID:WBGene00006665 Length:429 Species:Caenorhabditis elegans


Alignment Length:181 Identity:55/181 - (30%)
Similarity:86/181 - (47%) Gaps:23/181 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQN----LRVNLTENIWLL-----SDDAVVLR 96
            ||.|:||.:.|...||..|.:.|.|.|..:.|.::.    ||....||:..:     ||:..|..
 Worm    39 HVGLILLCILYVHFGALFFMYSESPEEQRILRRVEKRYDILRETFLENVNRVKLEDFSDERRVNE 103

  Fly    97 E-SDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQ------WTFAGSLFYSIIVITTIGYG 154
            . |..:.:.|||:.   |.....:.|:.:|   .|..||      ||...||.::...|..:|||
 Worm   104 SISRLIDDYSKHMF---KLFTNPVAANMFD---CLFYSQSNYTPLWTTDSSLLFTATTIIPVGYG 162

  Fly   155 HISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSF-RFLYWRICCYV 204
            :|:|.|..|::....||..||||.|:.:|::|...|.:| :|.:..|..::
 Worm   163 YIAPLTSTGRIVLCIYAAFGIPLALVMMSDVGKFFADAFVKFFHENITAFM 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 26/79 (33%)
Ion_trans_2 626..706 CDD:462301
twk-10NP_001300134.1 Ion_trans_2 128..199 CDD:462301 25/73 (34%)
Ion_trans_2 218..286 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.