DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-4

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001343566.1 Gene:twk-4 / 192079 WormBaseID:WBGene00006659 Length:418 Species:Caenorhabditis elegans


Alignment Length:153 Identity:44/153 - (28%)
Similarity:80/153 - (52%) Gaps:12/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVS 105
            |::|:...|:|.:.|||||..:|...||:..:....:..|...|::..|:.:|        |:|.
 Worm    91 HLVLIFATVAYIIAGAYLFTKIEHQAELDRYQSYHTIYRNFINNLYQSSNRSV--------ADVE 147

  Fly   106 KHLANFEKQILTAIKADGWDGDEDL---RKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTT 167
            ..:..|......|.| :|....:.|   ..|:|:...::|::..|:|:||||::.|.:..||:..
 Worm   148 NLIDTFTSINFRAFK-EGLKPTDFLVPQETSRWSMISAIFFTTTVLTSIGYGNLIPISTGGKIFC 211

  Fly   168 IFYAIVGIPLMLICLSNIGDVMA 190
            :.|||.||||.|:.::::...:|
 Worm   212 VGYAIFGIPLTLVTIADLAKFVA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 24/76 (32%)
Ion_trans_2 626..706 CDD:462301
twk-4NP_001343566.1 Ion_trans_2 <174..235 CDD:462301 21/61 (34%)
Ion_trans_2 255..329 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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