DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-4

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001343566.1 Gene:twk-4 / 192079 WormBaseID:WBGene00006659 Length:418 Species:Caenorhabditis elegans


Alignment Length:153 Identity:44/153 - (28%)
Similarity:80/153 - (52%) Gaps:12/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVS 105
            |::|:...|:|.:.|||||..:|...||:..:....:..|...|::..|:.:|        |:|.
 Worm    91 HLVLIFATVAYIIAGAYLFTKIEHQAELDRYQSYHTIYRNFINNLYQSSNRSV--------ADVE 147

  Fly   106 KHLANFEKQILTAIKADGWDGDEDL---RKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTT 167
            ..:..|......|.| :|....:.|   ..|:|:...::|::..|:|:||||::.|.:..||:..
 Worm   148 NLIDTFTSINFRAFK-EGLKPTDFLVPQETSRWSMISAIFFTTTVLTSIGYGNLIPISTGGKIFC 211

  Fly   168 IFYAIVGIPLMLICLSNIGDVMA 190
            :.|||.||||.|:.::::...:|
 Worm   212 VGYAIFGIPLTLVTIADLAKFVA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 19/54 (35%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
twk-4NP_001343566.1 Ion_trans_2 <178..235 CDD:311712 20/57 (35%)
Ion_trans_2 255..329 CDD:311712
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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