DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and kvs-4

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001367099.1 Gene:kvs-4 / 190011 WormBaseID:WBGene00012967 Length:539 Species:Caenorhabditis elegans


Alignment Length:72 Identity:22/72 - (30%)
Similarity:38/72 - (52%) Gaps:15/72 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 SAYFCFITLTTIGFGDF----VPAKGVKDESEQSIAYCSLYLLFGIALLAMSFNLVQEEFIANVK 710
            :.::|.:|:||:|:||.    ||.|.|   :..:|| |      |:.:||:...::.:.|: .|.
 Worm   456 ACWWCIVTMTTVGYGDLTPVTVPGKLV---ATGAIA-C------GVLVLALPITIIVDNFM-KVA 509

  Fly   711 EVARRLG 717
            |..|..|
 Worm   510 ETERPAG 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921 18/62 (29%)
Ion_trans_2 626..706 CDD:285168 17/59 (29%)
kvs-4NP_001367099.1 BTB_POZ_Kv 121..208 CDD:349626
Ion_trans 265..513 CDD:395416 20/67 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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