DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-49

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001022268.1 Gene:twk-49 / 187626 WormBaseID:WBGene00019904 Length:337 Species:Caenorhabditis elegans


Alignment Length:234 Identity:59/234 - (25%)
Similarity:91/234 - (38%) Gaps:54/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RAQSLPAHMLEPAKPQRGRCVAAI---CFS-WKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLER- 64
            |..:....|||..|....|..:|.   ||. |       |.|||:||...:.:.||..|...|| 
 Worm    15 RLDTFNQDMLERVKASTSRISSATRSPCFQRW-------SPVLLILLTTVFILFGATCFYLFERD 72

  Fly    65 PHELEVKRDIQNLRV--------------NLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQI 115
            |||:.|::...||.|              |.|.|:.::.|.....|....:.   :.|..:|.: 
 Worm    73 PHEMTVRKWYMNLAVERRQFARTISSRIFNDTRNLLIIIDREQTERVQQLLV---ESLKRYEDK- 133

  Fly   116 LTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLI 180
            ||.:...         :.:|::..|..::..::.|||.|...|.|...::..:||.::||||...
 Worm   134 LTIVPPS---------RREWSWISSFNFAYSLLLTIGGGFKVPATVGSQIFAVFYCLIGIPLFYS 189

  Fly   181 CLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRNARSRQ 219
            .|.               .|.|.:.:...|.|...|||:
 Worm   190 TLI---------------LIVCRLVSPVLKWPSLTRSRR 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 15/54 (28%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
twk-49NP_001022268.1 Ion_trans_2 <144..191 CDD:369572 14/46 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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