DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-29

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001021467.1 Gene:twk-29 / 185828 WormBaseID:WBGene00006681 Length:476 Species:Caenorhabditis elegans


Alignment Length:192 Identity:55/192 - (28%)
Similarity:92/192 - (47%) Gaps:53/192 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WKVL-----TCIVSHVLLVLLVVSYCVGGAYLF--------QHLERPHELEVKRDIQNL-----R 78
            |:.|     ...|:..::|.|::...:|| ::|        |::::...||.:..|::|     |
 Worm    39 WECLQHNRRAIAVNGFIIVFLIIYTTIGG-FIFLNFEFEYQQYMKQNATLEKRLCIESLLNRDNR 102

  Fly    79 VNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFY 143
            :.||             |.||..|.::      |:.:...:|.|         :.||:|..:..|
 Worm   103 LRLT-------------RASDVAAAIA------ERCLTENVKDD---------RMQWSFKSAALY 139

  Fly   144 SIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIG---DVMATSFRFLYWRICC 202
            |:.::||:|||.|.|:|..|:::|:.|...||||.:|.|:|.|   :.|||.||.|   |.|
 Worm   140 SLGILTTLGYGKIEPQTINGRISTVIYGFFGIPLTVILLTNFGRYLEAMATRFRRL---ISC 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 26/76 (34%)
Ion_trans_2 626..706 CDD:462301
twk-29NP_001021467.1 Ion_trans_2 <131..186 CDD:462301 23/54 (43%)
Ion_trans_2 216..292 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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