DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-30

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_492381.3 Gene:twk-30 / 185335 WormBaseID:WBGene00006682 Length:608 Species:Caenorhabditis elegans


Alignment Length:187 Identity:53/187 - (28%)
Similarity:91/187 - (48%) Gaps:41/187 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRD----IQNLRVNLTENIWLLSDDAVVLRESDWM 101
            ||||:..||.|.:.||.:||.||..|...:|:|    |:....:..:.:|     :|..|:.|..
 Worm     8 HVLLIGSVVLYIILGAIVFQMLEGEHLDALKKDHMAKIEQNAKDYVDKLW-----SVAKRDRDKY 67

  Fly   102 ANVSKHLANFEKQILTAIKADGWDG-------------------DEDLRKSQWTFAGSLFYSIIV 147
            .||        :.::.::|.|..|.                   |||  ...|.||.|:|::..:
 Worm    68 KNV--------EDLIKSVKEDTVDDFNDYVDTVFYAHRAVRHGYDED--SPTWDFANSVFFTTTM 122

  Fly   148 ITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLY---WRIC 201
            :|:||||:::|.|..|::..:.|.::||||.|:.::|:...::.:..||:   |..|
 Worm   123 LTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTVANVAKFLSETIFFLHYELWNKC 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 26/92 (28%)
Ion_trans_2 626..706 CDD:462301
twk-30NP_492381.3 Ion_trans_2 103..166 CDD:462301 23/64 (36%)
Ion_trans_2 221..298 CDD:462301
FN3 <372..>565 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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