DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-28

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_508732.3 Gene:twk-28 / 183714 WormBaseID:WBGene00006680 Length:523 Species:Caenorhabditis elegans


Alignment Length:706 Identity:117/706 - (16%)
Similarity:195/706 - (27%) Gaps:412/706 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKR----DIQNLRVNLTENIWLLSDDA--VVLR 96
            |:.||.||:|:..|.:.||:||::||.|.|||.:.    .|..||....::||.::.|:  .:.|
 Worm    59 ILPHVGLVILLFLYLIAGAFLFRYLEAPKELETRNHELTTILGLRDEFQDHIWNITQDSDNRISR 123

  Fly    97 ESDWMAN--------------------VSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSL 141
            |:....|                    .:|||.|..::            ||.|    |||..|:
 Worm   124 EAFNAINQEYFEQLVKNMFQAYRNQFITAKHLLNKTRE------------DEVL----WTFPNSM 172

  Fly   142 FYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCT 206
            |::..||||||||::.|.|..|:|..|.:|::||||:|:.:::||..::....:||         
 Worm   173 FFAATVITTIGYGNLVPITVTGRVACIIFALLGIPLLLVTIADIGKFLSEFLSYLY--------- 228

  Fly   207 RTAKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRG 271
                  |:.|..:|.:|             |:|.|:|.:                          
 Worm   229 ------RSYRGFKRKLR-------------RQSKKITSQ-------------------------- 248

  Fly   272 YDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRH 336
                                                   |.:|:.:||:                
 Worm   249 ---------------------------------------YRSQSQSRSS---------------- 258

  Fly   337 TVERERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKS 401
                                                                   |..|.|:|.|
 Worm   259 -------------------------------------------------------SVMGSSKAGS 268

  Fly   402 VDPRHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERS 466
            ::                                                               
 Worm   269 MN--------------------------------------------------------------- 270

  Fly   467 PQPPPQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESF 531
                       .||                                                   
 Worm   271 -----------LHD--------------------------------------------------- 273

  Fly   532 DEGSLYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYD 596
                                                                         .|.|
 Worm   274 -------------------------------------------------------------IDSD 277

  Fly   597 DDDSMYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTI 661
            .:||. |||.           .:|:::.:.::::|...|..||..||:..:.::.||||||:.|:
 Worm   278 SEDSA-GDEL-----------RIPVFMVLLVLLAYTAIGGFLFQSWEHLEYFEAFYFCFITMATV 330

  Fly   662 GFGDFVPAKGVKDESEQSIAYCSL-YLLFGIALLAMSFNLVQEEFIANVKEVARRL 716
            ||||.||       :||...:.:: |::||::|..|..:|...|:|..:..:..::
 Worm   331 GFGDIVP-------NEQVYVFFTMAYIIFGLSLATMCIDLAGTEYIRKIHYLGTKM 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 29/73 (40%)
Ion_trans_2 626..706 CDD:462301 28/80 (35%)
twk-28NP_508732.3 Ion_trans_2 <161..222 CDD:462301 29/76 (38%)
Ion_trans_2 292..370 CDD:462301 28/84 (33%)

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