DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-28

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_508732.3 Gene:twk-28 / 183714 WormBaseID:WBGene00006680 Length:523 Species:Caenorhabditis elegans


Alignment Length:706 Identity:117/706 - (16%)
Similarity:195/706 - (27%) Gaps:412/706 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKR----DIQNLRVNLTENIWLLSDDA--VVLR 96
            |:.||.||:|:..|.:.||:||::||.|.|||.:.    .|..||....::||.::.|:  .:.|
 Worm    59 ILPHVGLVILLFLYLIAGAFLFRYLEAPKELETRNHELTTILGLRDEFQDHIWNITQDSDNRISR 123

  Fly    97 ESDWMAN--------------------VSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSL 141
            |:....|                    .:|||.|..::            ||.|    |||..|:
 Worm   124 EAFNAINQEYFEQLVKNMFQAYRNQFITAKHLLNKTRE------------DEVL----WTFPNSM 172

  Fly   142 FYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCT 206
            |::..||||||||::.|.|..|:|..|.:|::||||:|:.:::||..::....:||         
 Worm   173 FFAATVITTIGYGNLVPITVTGRVACIIFALLGIPLLLVTIADIGKFLSEFLSYLY--------- 228

  Fly   207 RTAKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRG 271
                  |:.|..:|.:|             |:|.|:|.:                          
 Worm   229 ------RSYRGFKRKLR-------------RQSKKITSQ-------------------------- 248

  Fly   272 YDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRH 336
                                                   |.:|:.:||:                
 Worm   249 ---------------------------------------YRSQSQSRSS---------------- 258

  Fly   337 TVERERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKS 401
                                                                   |..|.|:|.|
 Worm   259 -------------------------------------------------------SVMGSSKAGS 268

  Fly   402 VDPRHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERS 466
            ::                                                               
 Worm   269 MN--------------------------------------------------------------- 270

  Fly   467 PQPPPQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESF 531
                       .||                                                   
 Worm   271 -----------LHD--------------------------------------------------- 273

  Fly   532 DEGSLYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYD 596
                                                                         .|.|
 Worm   274 -------------------------------------------------------------IDSD 277

  Fly   597 DDDSMYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTI 661
            .:||. |||.           .:|:::.:.::::|...|..||..||:..:.::.||||||:.|:
 Worm   278 SEDSA-GDEL-----------RIPVFMVLLVLLAYTAIGGFLFQSWEHLEYFEAFYFCFITMATV 330

  Fly   662 GFGDFVPAKGVKDESEQSIAYCSL-YLLFGIALLAMSFNLVQEEFIANVKEVARRL 716
            ||||.||       :||...:.:: |::||::|..|..:|...|:|..:..:..::
 Worm   331 GFGDIVP-------NEQVYVFFTMAYIIFGLSLATMCIDLAGTEYIRKIHYLGTKM 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 26/54 (48%)
NESP55 341..586 CDD:115071 7/244 (3%)
Ion_trans <621..709 CDD:278921 29/88 (33%)
Ion_trans_2 626..706 CDD:285168 28/80 (35%)
twk-28NP_508732.3 Ion_trans_2 <166..222 CDD:285168 26/55 (47%)
Ion_trans_2 295..370 CDD:285168 28/81 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8678
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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