DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-39

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001076639.1 Gene:twk-39 / 182864 WormBaseID:WBGene00006690 Length:676 Species:Caenorhabditis elegans


Alignment Length:807 Identity:207/807 - (25%)
Similarity:318/807 - (39%) Gaps:284/807 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENI 85
            |..|:....|........::||.|..||..|.|.||::||.:|.|:||.::..::|..:.:.::|
 Worm     6 RSFCLKFTTFVKSATIFTITHVGLCFLVALYAVAGAFMFQAVEYPYELGLQGKVKNASLKVVDDI 70

  Fly    86 WL------LSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWD-GDEDLRKSQWTFAGSLFY 143
            :.      :.::..|..||.|.      |..||..::.|:..:|:| .||:....||||:|:|.|
 Worm    71 YRFINRKNVIEETAVKNESQWA------LKEFEMLLVHAMNFEGYDEHDEERPTFQWTFSGALLY 129

  Fly   144 SIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRT 208
            ||.|.||||||||.|:||.|::.||.|:|:||||||:||:||.:.:|..|.::|:::||..|   
 Worm   130 SITVFTTIGYGHICPKTDTGRLLTILYSILGIPLMLLCLANIAETLAQVFTYIYFKLCCAYC--- 191

  Fly   209 AKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRGYD 273
                |..::|:|..|:....|..|..:.......:.||                           
 Worm   192 ----RWQKNRRRVRRAALSFRYHPNAAVNVRRVQSSRS--------------------------- 225

  Fly   274 DREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTV 338
                                                   .|..|...|::|..|.|.|..|..:|
 Worm   226 ---------------------------------------NQRYNTVRRHASLNRSRTRSNDTKSV 251

  Fly   339 ER-ERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSP-----------------HNQESSKASR 385
            .. .||..::........|..|..|.:|..|.:| |||                 |.|:|:.|. 
 Worm   252 RSFNRYDSTNTQPVQPPRFDTMSLPGRRKISTQS-RSPNGTMPRLPNFPQPKRGAHLQKSNTAI- 314

  Fly   386 ELHRLHSAPGRSR----AKSVDPRH-------VSSHYEDVDEDVVRKTPIIPNRYALDDFGGN-- 437
            .:.:|::...|||    |.|..|..       |.:.::. ||.||          .|..:||:  
 Worm   315 NMEQLYTDEKRSRRGRHAVSESPAREYKGGLLVRAQHQP-DEGVV----------DLKAYGGSAA 368

  Fly   438 ----------RRQAAPRSQSMPRSAHQRQRQK------DRERERS--------PQPPPQ--SSYR 476
                      ||..|    ::|.....|.|.:      |:..|.|        .|.||:  :|.|
 Worm   369 AFHDLVTRKPRRDDA----AVPNVIISRTRDEDVKSDPDKTEETSMSLTDDEDMQKPPRRNNSAR 429

  Fly   477 QQHDR----------RAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESF 531
            :..::          :..|:...:||     .|.|.|    ||.:|.||            .|..
 Worm   430 ELREKEMMMMNSLNHKQPSMDSSTSR-----RLRDID----GRSYRSDR------------SERS 473

  Fly   532 DEGSLYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYD 596
            ||.||              ||..|...||:.:                                 
 Worm   474 DEMSL--------------HSLRRNGHRNQEK--------------------------------- 491

  Fly   597 DDDSMYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTI 661
                                .||.:.:|:  |.::|.|||.||::||||:..|.||:|||||:||
 Worm   492 --------------------MPVSVGICI--VFAFISGGAWLFSWWENWNGFDGAYYCFITLSTI 534

  Fly   662 GFGDFVPAKGVKDESEQSIAYCSLYLLFGIALLAMSFNLVQEEFIANVKEVARRLGIL------- 719
            ||||.||.:.:.:.|::.:..|:||||||:||:||.|.|:|::.:...:.:.:::|||       
 Worm   535 GFGDIVPGQALDEGSQEKLVVCALYLLFGMALIAMCFKLMQDDVVQKARWLGQKIGILARPFELS 599

  Fly   720 -----------------KDDDDEQDED 729
                             :|:..|.:.|
 Worm   600 REIAKHAIFLFGYSVSIRDESSESESD 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 36/54 (67%)
NESP55 341..586 CDD:115071 65/310 (21%)
Ion_trans <621..709 CDD:278921 43/87 (49%)
Ion_trans_2 626..706 CDD:285168 42/79 (53%)
twk-39NP_001076639.1 Ion_trans_2 <120..177 CDD:285168 36/56 (64%)
Ion_trans_2 498..580 CDD:285168 43/83 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156533
Domainoid 1 1.000 100 1.000 Domainoid score I4417
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0016750
OrthoInspector 1 1.000 - - oto17350
orthoMCL 1 0.900 - - OOG6_113981
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2863
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.850

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