DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and unc-58

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001360793.1 Gene:unc-58 / 181224 WormBaseID:WBGene00006792 Length:616 Species:Caenorhabditis elegans


Alignment Length:233 Identity:61/233 - (26%)
Similarity:106/233 - (45%) Gaps:51/233 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRD----IQNLRVNLTENIWLLSDDA- 92
            |.:..:..||:||.:::.|...||::...||...||..:..    :.||..|.|...|.:.::| 
 Worm   187 KYIKILTPHVILVSVLIGYLCLGAWILMLLETRTELLARSKKLVRLTNLMSNFTAESWKMLNNAQ 251

  Fly    93 ---VVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRK------------SQWTFAGSLF 142
               ..:.|.:|.|...:.:....:.:         |....:|:            ::|||..::.
 Worm   252 HGVSNMDEGEWAATFREWMVRVSETV---------DDRRPIRRELNRPDDLSNMHNKWTFPTAIL 307

  Fly   143 YSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMA-TSFRFL-YWRICCYVC 205
            |.:.|:||.|||.:|..||.|||.::.:|:||||||.|..::||..:: |..:|: :|.      
 Worm   308 YVLTVLTTCGYGEVSVDTDVGKVFSVAFALVGIPLMFITAADIGKFLSETLLQFVSFWN------ 366

  Fly   206 TRTAKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMT 243
                   |:.|..::.|...||.|       |:|::.|
 Worm   367 -------RSVRKVKQWMSRIRHGR-------RKSLQST 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 26/54 (48%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
unc-58NP_001360793.1 Ion_trans_2 <299..355 CDD:369572 26/55 (47%)
Ion_trans_2 435..498 CDD:369572
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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