DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-18

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001379714.1 Gene:twk-18 / 181139 WormBaseID:WBGene00006672 Length:461 Species:Caenorhabditis elegans


Alignment Length:164 Identity:55/164 - (33%)
Similarity:87/164 - (53%) Gaps:14/164 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMA---- 102
            :|.::::|:|.:.||::|..:|..:|.|:..:.|..|..|........:...:.|:...|.    
 Worm    22 LLPLIILVAYTLLGAWIFWMIEGENEREMLIEQQKERDELIRRTVYKINQLQIKRQRRLMTAEEE 86

  Fly   103 --NVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKV 165
              ..:|.|..|: :.|..:.|   |.|:|:   .|||.||:||.:.|.||||||:|.|.|.||:.
 Worm    87 YNRTAKVLTTFQ-ETLGIVPA---DMDKDI---HWTFLGSIFYCMTVYTTIGYGNIVPGTGWGRF 144

  Fly   166 TTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWR 199
            .||.||.:||||.::.|..:|.:.|...:.| ||
 Worm   145 ATILYAFIGIPLTVLSLYCLGSLFAKGCKML-WR 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 34/73 (47%)
Ion_trans_2 626..706 CDD:462301
twk-18NP_001379714.1 Ion_trans_2 <113..170 CDD:462301 29/56 (52%)
Ion_trans_2 232..306 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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