DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-17

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001024464.1 Gene:twk-17 / 181024 WormBaseID:WBGene00006671 Length:576 Species:Caenorhabditis elegans


Alignment Length:480 Identity:118/480 - (24%)
Similarity:189/480 - (39%) Gaps:136/480 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKR-----------DIQNLRVNLTENIW 86
            |:|..::.||.|.:|::||...||.:|..||..||||.::           .|.|..:.||.|  
 Worm   135 KLLKILLPHVGLNVLLLSYIAMGATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN-- 197

  Fly    87 LLSDDA-VVLRESDWMANVSKHLANFEK-----QILTAIKADGWDGDEDLRKSQWTFAGSLFYSI 145
             .||.| :|.|....:.::|:.....:|     |:        |.|::|...::||||.:..|::
 Worm   198 -QSDQATIVSRMRPLLESLSRAHEYDDKFTDTNQL--------WTGEQDGMTTRWTFAAATLYAL 253

  Fly   146 IVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGD-----VMATSFRFL-YWRICCYV 204
            .|||:.||.|::|.||.|::.|:|:.::|||||.|..::||.     |:.|..:.| .|::...:
 Worm   254 TVITSTGYDHVTPATDPGRIFTVFFGLIGIPLMFITAADIGKFLSEIVIRTYAKLLAMWKMIANL 318

  Fly   205 --CTRT----------------AKRPRNARSRQRSMRSQRHARSQ-PPPSFRRSMKMTQRSG--- 247
              ..||                ..:.|||.|...........|.| |..|:     .|...|   
 Worm   319 VELVRTHLFDTDVDSIDSMELKKSKKRNASSLDDEECEDEEDRLQLPIASY-----FTLIIGYCC 378

  Fly   248 ------NDSGLGP--SMGHA--YSDPDLRTMGRGYDDREFGHRSSGGGRNRRQQQQQHLHHDPRQ 302
                  |....||  |..|.  :|...:.|:|.|               |.|  .|||.:.....
 Worm   379 VGSLLFNTFEKGPVWSFIHGVFFSFNTITTIGLG---------------NIR--VQQHYYLALAV 426

  Fly   303 RHTIYGDGYETQTLNRSN----------RYSSRQRQ-------------RDRMRDRHTVERERYS 344
            .:.|.|....|.:|:..:          .|..|:.:             |:.||....:::.|.|
 Worm   427 SYVIIGLAVITASLDLCSSTLKRTFTKLHYFGRKIRGARRGFANMSDDIREAMRIIAALKKTRPS 491

  Fly   345 RSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKSVDPR---- 405
            :..:....::.|.::|....|...|     |:|         :|.|     |....:|.|:    
 Worm   492 KDRITLEDLKRFLEVQEHLLRQPYV-----PYN---------VHLL-----RWIEDNVGPQMKNE 537

  Fly   406 -HVSSHYEDVDEDVV-RKTPIIPNR 428
             .::..|....:||. .|||:.|:|
 Worm   538 FSLAEQYAQYMDDVSGGKTPMSPSR 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 28/78 (36%)
Ion_trans_2 626..706 CDD:462301
twk-17NP_001024464.1 Ion_trans_2 237..299 CDD:462301 26/61 (43%)
Ion_trans_2 379..449 CDD:462301 18/86 (21%)
Blue background indicates that the domain is not in the aligned region.

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