DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-16

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_508526.2 Gene:twk-16 / 180594 WormBaseID:WBGene00006670 Length:555 Species:Caenorhabditis elegans


Alignment Length:599 Identity:117/599 - (19%)
Similarity:179/599 - (29%) Gaps:229/599 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVS 105
            |..|::||:.|...|.::|..:|.....|:||   |.|:|.|..:      :.:|......::..
 Worm    26 HCSLLMLVLLYSFLGGFIFDRIETNAHAEMKR---NERINRTACV------SQILHSIHRWSHNQ 81

  Fly   106 KHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFY 170
            .|...:.:.|     ||.::.::| .:|:|.|..:..|...::||:||..|:|.|..|::..|.|
 Worm    82 THKVQYAEDI-----ADCFEPEKD-ERSEWNFVTATLYGFGIVTTLGYNRIAPITYTGRMFCIVY 140

  Fly   171 AIVGIPLMLICLSNIG------------------------------------DVMATS------- 192
            .|.|||:.:|.::|:|                                    .:..||       
 Worm   141 GICGIPVTMIIIANVGQYLNNFAGDSRRKIEAYRQQRRMSKASLAGKIYKESSIQVTSLALLCVF 205

  Fly   193 --------------------FRFLYWRICC----------------------YVCTRTA------ 209
                                |..||:...|                      |||...|      
 Worm   206 LIYVAVGALLLPLLNGELDFFNGLYFNFLCLTAIDFGQLVPIRVELLPITFLYVCIGLAITTIAI 270

  Fly   210 --------------KRPRNAR-------SRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLG 253
                          |:.:||.       .:...:|...||                 .|...|:.
 Worm   271 NIGSEYMKKLHYWGKKMKNAAQTRIWFGGKTLKVRDLLHA-----------------VGKKCGVE 318

  Fly   254 PSMGHAYSDPDL-----RTMG----------------RGYDDREFGH-----RSSGGGRNRRQQQ 292
            |.|..|.   ||     ||:.                |....|...|     |.|....:....:
 Worm   319 PGMIDAL---DLENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSNPPMSPPSPR 380

  Fly   293 QQH---LHHD-PRQRHTIYGDGYET-------QTLNRSNRYSSRQRQRDRMRDRHTVERERYSRS 346
            :.|   ...| |..|..:....||.       |.|  ||.:.::..|.....|..|.:.|     
 Worm   381 EDHPFIFKMDAPAPRSPLPLPAYELDIKKPIFQAL--SNEFMNQSAQEKLFNDLDTFQIE----- 438

  Fly   347 HLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQES-----SKASRELHRLHSAPGRSRAKSV---- 402
             ::...:||        .:..||..:..|...|.     |....:..|....|.|.|.|..    
 Worm   439 -INTELVED--------HKCESVIIIEPPATFEDMTIQHSLCVEDYEREEKVPKRFREKKEMYGR 494

  Fly   403 DPRHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERSP 467
            |||.:   ||...|:..|...:...::     |..|:.....|...|            ||..||
 Worm   495 DPRKL---YETYQEEWDRLERLSDRKH-----GPRRKSVLNLSNCSP------------ERSVSP 539

  Fly   468 QPPPQSSYRQQHDR 481
            .|...|...:.|.|
 Worm   540 SPIRHSLTGEGHRR 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 25/109 (23%)
Ion_trans_2 626..706 CDD:462301
twk-16NP_508526.2 Ion_trans_2 <101..159 CDD:462301 21/57 (37%)
Blue background indicates that the domain is not in the aligned region.

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