DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-46

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_741678.1 Gene:twk-46 / 180252 WormBaseID:WBGene00006696 Length:319 Species:Caenorhabditis elegans


Alignment Length:144 Identity:48/144 - (33%)
Similarity:73/144 - (50%) Gaps:23/144 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LVVSYCVGGAYLFQHLERPHELEVKR----DIQNLRVNLTENIWLLSDDAVVLRESDWMANVSKH 107
            :.|.|...||.:|..:|.|.| :::|    |.||.        |   .|.::..:.| .:.:.|.
 Worm    33 VAVVYLFVGAIVFVRIEYPLE-KIEREAYLDYQNQ--------W---RDRLIQLDID-ESEIDKL 84

  Fly   108 LANFEKQILTAIKADGWDGDEDLRKS-QWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYA 171
            ..|..:..|..|    | .|.:|... .|||..:.|::..:|:|:|||.:||||::||:.||.|.
 Worm    85 FLNIREAALNGI----W-MDRNLTSDPNWTFGQAFFFAGTLISTVGYGRVSPRTEYGKLFTILYC 144

  Fly   172 IVGIPLMLICLSNI 185
            ::||||.|..||.|
 Worm   145 VIGIPLTLALLSAI 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 26/52 (50%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
twk-46NP_741678.1 Ion_trans_2 <107..164 CDD:285168 26/52 (50%)
Ion_trans_2 198..274 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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