DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-36

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_507485.2 Gene:twk-36 / 180164 WormBaseID:WBGene00006688 Length:562 Species:Caenorhabditis elegans


Alignment Length:425 Identity:84/425 - (19%)
Similarity:141/425 - (33%) Gaps:166/425 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHE---LEVKRDIQNLRVNLTENIWLLSDDAVVLRES---D 99
            ::.|::|.:.|.:.||.:|..:|..:|   |.|:.  |||..       ||.:.|.||.|:   .
 Worm   170 YIALLVLALIYTLLGATVFYLIEGSNEKSRLHVRE--QNLDK-------LLDELATVLSEAVNDP 225

  Fly   100 WMANVSKHLANFEKQILTAIKADGWDGDEDLRKS-----------QWTFAGSLFYSIIVITTIGY 153
            ..::..:.:..|.|:...:::..    :|..:.|           :|||:.:.|:|:.|.||.||
 Worm   226 EQSSEHQRMKEFIKESYISLQKH----EEQYKWSTYYRLEHPDNLKWTFSSAFFFSMNVYTTTGY 286

  Fly   154 GHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRNARSR 218
            |.||.:|..|::.|:.||...:|:.|:.|.::|.:...:|..||               .:..:.
 Worm   287 GSISAQTFSGQLFTMIYAFCFVPVTLVILRDLGQMFLVNFTKLY---------------AHGLTA 336

  Fly   219 QRSMRSQRHARSQ---------------------------------------------------- 231
            .|.:|.:|.....                                                    
 Worm   337 VRRIRGKREVDEDEIIQLPIKFCMTILIAYLLLCTTFVYLYDAVMGPEWDDGLPYFTAFYFSFIS 401

  Fly   232 -----------------PPPSF---------------------------------RRSMKMTQRS 246
                             ||.|.                                 :.||.:|:|.
 Worm   402 LTTIGLGDVMPNNVPYAPPVSMIFFIGMAVTKVVNRATFIAVENGVFGLMTLAETKISMLLTERK 466

  Fly   247 -GNDSGLGPSMGHAYSDPDLRTMGRGYD-DREFGHRSSGGGRNRRQQQQQH------LHHDPRQR 303
             |..:....|.|.:....|.:. .||:| |.:.|  |..|..|||:.:..:      :....|..
 Worm   467 PGVKTVRSTSSGSSAESVDSKE-PRGFDGDSDSG--SDDGVINRRRNEMMNTFTVRSIATFMRSN 528

  Fly   304 HTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTV 338
            |.:||.|:....|.|.:..||..        .|||
 Worm   529 HDVYGGGFGRVQLRRGDLMSSNA--------LHTV 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 22/54 (41%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
twk-36NP_507485.2 Ion_trans_2 255..322 CDD:285168 23/66 (35%)
Ion_trans_2 361..432 CDD:285168 3/70 (4%)
Ion_trans <363..452 CDD:278921 3/88 (3%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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