DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and twk-42

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_507483.1 Gene:twk-42 / 180163 WormBaseID:WBGene00006692 Length:444 Species:Caenorhabditis elegans


Alignment Length:686 Identity:100/686 - (14%)
Similarity:183/686 - (26%) Gaps:398/686 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVS 105
            |::.:.:::.|...||.||...|..:|..:|.: .|:||..|.    ::...|.::....|.:.:
 Worm    17 HLVKIGVLIVYSFLGAGLFVLCEAENEKSLKHE-DNMRVLRTS----IAAKQVFVQRLQNMYSGN 76

  Fly   106 KHLANFEKQILTAIKAD-----GWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKV 165
            ...:.|.:..|..:.::     |...|..: |::|...|.|:|:..:.||||||.::..|.||::
 Worm    77 GSSSEFSETKLRRVLSEYDAAMGISIDSKM-KTRWDIWGGLYYAGTIYTTIGYGDLAAETIWGRI 140

  Fly   166 TTIFYAIVGIPLMLICLSNIGDVMATSFRFL--YWRICCYVCTRTAKRPRNARSRQRSMRSQRHA 228
            .|:.||::|||:::..|::.|:::   |.|:  :|                              
 Worm   141 CTMLYAMIGIPIVINILNDWGNML---FYFVDHFW------------------------------ 172

  Fly   229 RSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGRGYDDREFGHRSSGGGRNRRQQQQ 293
                                                                             
 Worm   173 ----------------------------------------------------------------- 172

  Fly   294 QHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDRHTVERERYSRSHLDAGSIEDFGD 358
                                |.:.|....|.||:.|     |..|:       .|:.|||:    
 Worm   173 --------------------QNIGRQWIQSLRQKLR-----RRKVQ-------SLEEGSID---- 201

  Fly   359 MQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAKSVDPRHVSSHYEDVDEDVVRKTP 423
                                                                          |||
 Worm   202 --------------------------------------------------------------KTP 204

  Fly   424 IIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERERSPQPPPQSSYRQQHDRRAGSLGR 488
            ::                                                               
 Worm   205 LM--------------------------------------------------------------- 206

  Fly   489 QSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEESFDEGSLYGDNNYEDYPPERHHSR 553
                                                                             
 Worm   207 ----------------------------------------------------------------- 206

  Fly   554 SREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDYDDDDSMYGDEYGDYGDLLPKDRP 618
                       .....||||:  :|.|                                   .||
 Worm   207 -----------ETSSTPPSPQ--NPNG-----------------------------------TRP 223

  Fly   619 VPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTTIGFGDFVPAKGVKDESEQSIAYC 683
            :|:.|.:.::..:::.....|||:|||:..:|.||.||::||||||||.|:        .::|..
 Worm   224 IPLLLVLIVLFFWMIQCVAYFAYFENWTLFESVYFFFISMTTIGFGDFTPS--------HTVAVG 280

  Fly   684 SL-YLLFGIALLAMSFNLVQE--EFIANVKEVARRL 716
            .: ::|.|:::::|..|::|.  |||.|  ::.:|:
 Worm   281 GIVFILGGLSVVSMCINVIQMQLEFIFN--QIVQRI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 21/54 (39%)
NESP55 341..586 CDD:115071 13/244 (5%)
Ion_trans <621..709 CDD:278921 30/90 (33%)
Ion_trans_2 626..706 CDD:285168 27/82 (33%)
twk-42NP_507483.1 Ion_trans_2 <109..165 CDD:285168 21/58 (36%)
Ion_trans_2 236..304 CDD:285168 26/75 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.