DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and twk-24

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001367093.1 Gene:twk-24 / 179682 WormBaseID:WBGene00006677 Length:579 Species:Caenorhabditis elegans


Alignment Length:229 Identity:51/229 - (22%)
Similarity:103/229 - (44%) Gaps:38/229 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HVLLVLLVVSYCVGGAYLFQHLERPHE-------LEVKRDIQNLRVNLTENIWLLSDDAVVLRES 98
            |:..::::.|:.:.|..:|..:|..:|       .|.::|:...|....|.::..      |||.
 Worm   117 HIAWLVVLFSFSLFGGVIFSAIEGGYETTQLIKKFEHEKDVYERRKIYQEQLFQR------LREI 175

  Fly    99 D---------------WMANVSKH-LANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIV 147
            :               :....|:| |..:|:::...|:      :..:|:::|...|.::||..:
 Worm   176 EHDNTNPRGRNSSREHFKLEQSRHALEWYEQKMGVTIE------EPQMRETKWNLWGGVYYSASL 234

  Fly   148 ITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRP 212
            .||||||:..|.|..|::.::.||.:||||:...|.:.|.:..|...:.:.|.....|.::.:|.
 Worm   235 YTTIGYGNFHPLTKSGRIISMMYACIGIPLVFTILLDWGFLYFTWIEYGWNRFNENFCQKSLQRD 299

  Fly   213 RNARSRQRSMR---SQRHARSQPPPSFRRSMKMT 243
            ...|.|:..:|   |:....|..|...|.:.:::
 Worm   300 MQRRIRRERIRRVGSELSLSSTAPLLHRTTTQLS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 23/73 (32%)
Ion_trans_2 626..706 CDD:462301
twk-24NP_001367093.1 Ion_trans_2 <221..273 CDD:462301 20/51 (39%)
Blue background indicates that the domain is not in the aligned region.

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