DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and egl-23

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001255775.1 Gene:egl-23 / 178358 WormBaseID:WBGene00001190 Length:726 Species:Caenorhabditis elegans


Alignment Length:256 Identity:61/256 - (23%)
Similarity:107/256 - (41%) Gaps:86/256 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KVLTCIVSHVLLVLLVVSYCVGGAYLFQHLE--RPHELEVKRDIQNLRVNLT------------- 82
            |..|.:..|.|:::.|.:|.:.||.:.:.||  ....:|.|.|:....||||             
 Worm    53 KKATPLFVHFLMIVSVGAYAIFGALVMRSLESRTVTSIEKKTDVHRRHVNLTNFQHPPTPITLEQ 117

  Fly    83 -------ENIWLLSDD------------AVVLRESDWMANVSKHLANFE-------KQILTA--- 118
                   .|...|.|.            |.::|....:.:|.|.:::.|       ::::.|   
 Worm   118 RHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSFDTLDEKLVKALDE 182

  Fly   119 -----------------------IKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRT 160
                                   :::.|.:.:||:  |:|:|..||.::..||||||||:::|||
 Worm   183 CYHVAVEHNTHVNHVLFTNSKEEVESVGEEAEEDV--SEWSFMDSLLFAFTVITTIGYGNVAPRT 245

  Fly   161 DWGKVTTIFYAIVGIPLMLICLSNIGD------VMATSFRFLYWRICCYVCTRTAKRPRNA 215
            ..|::..|.|.::|||..|:.::::|.      |.|.||           |.:|.|:.:.|
 Worm   246 FGGRLFVIGYGLIGIPFTLLAIADLGKFISEMMVEAKSF-----------CRKTWKKLKKA 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 23/60 (38%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
egl-23NP_001255775.1 Ion_trans_2 216..276 CDD:285168 25/61 (41%)
Ion_trans_2 347..423 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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