DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment galene and twk-31

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001022884.1 Gene:twk-31 / 176572 WormBaseID:WBGene00006683 Length:1136 Species:Caenorhabditis elegans


Alignment Length:191 Identity:62/191 - (32%)
Similarity:94/191 - (49%) Gaps:24/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKR----DIQNLRVNLTENIWLLSDDAVVLRES 98
            |.:.|||||    |...||::|...|..:|.|||.    |::.||.:..:.|     .::|.|:.
 Worm   145 ISASVLLVL----YSFLGAWVFYLFEHDYEREVKLKERIDLRMLRNDTFQRI-----SSMVFRQQ 200

  Fly    99 DWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWG 163
            . :||..:...::||::......:..|         |.:.|:|||...:.||||||:|.|||..|
 Worm   201 G-LANFEEVFIDYEKKLHVVRLPECLD---------WDYWGALFYVGTLFTTIGYGNIYPRTALG 255

  Fly   164 KVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWRICCYVCTRTAKRPRNARSRQRSMRS 224
            :..::.||||||||:|..||..|..|..|.. ..|:......|..||..:|....::.::|
 Worm   256 RAASVVYAIVGIPLVLAILSKCGKWMTDSLS-EKWQQHRIQITEKAKMTKNRLRGKKILKS 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 29/73 (40%)
Ion_trans_2 626..706 CDD:462301
twk-31NP_001022884.1 Ion_trans_2 <227..283 CDD:462301 29/55 (53%)
Ion_trans_2 347..423 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.