DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk2

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001153322.1 Gene:Kcnk2 / 16526 MGIID:109366 Length:426 Species:Mus musculus


Alignment Length:188 Identity:59/188 - (31%)
Similarity:86/188 - (45%) Gaps:49/188 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHELEVKRDI---------QNLRVNLTENIWL 87
            ||.::.|      .|:||.|.:.||.:|:.||:|.|:..:..|         |:..||.||    
Mouse    59 WKTVSTI------FLVVVLYLIIGATVFKALEQPQEISQRTTIVIQKQTFIAQHACVNSTE---- 113

  Fly    88 LSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWD-GDEDLRKSQWTFAGSLFYSIIVITTI 151
                                |....:||:.||.|.... |:...:.|.|....|.|::..|||||
Mouse   114 --------------------LDELIQQIVAAINAGIIPLGNSSNQVSHWDLGSSFFFAGTVITTI 158

  Fly   152 GYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSF---------RFLYWRI 200
            |:|:|||||:.||:..|.||::||||....|:.:||.:.|.|         .|:.|.:
Mouse   159 GFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 33/74 (45%)
Ion_trans_2 626..706 CDD:462301
Kcnk2NP_001153322.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Important for GNG4 binding and L-glutamate release in astrocytes. /evidence=ECO:0000250|UniProtKB:Q920B6 17..38
Important for GNG4 binding and L-glutamate release in astrocytes. /evidence=ECO:0000250|UniProtKB:Q920B6 51..61 1/1 (100%)
Ion_trans_2 <138..196 CDD:462301 28/57 (49%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:Q920B6 157..162 3/4 (75%)
Ion_trans_2 234..312 CDD:462301
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q920B6 266..271
Interaction with AKAP5. /evidence=ECO:0000305|PubMed:17110924 298..311
Interaction with AKAP5. /evidence=ECO:0000305|PubMed:17110924 313..326
Essential for chloroform and halothane sensitivity. /evidence=ECO:0000269|PubMed:10321245 337..385
Blue background indicates that the domain is not in the aligned region.

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