DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk6

DIOPT Version :9

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_446258.2 Gene:Kcnk6 / 116491 RGDID:621450 Length:313 Species:Rattus norvegicus


Alignment Length:150 Identity:46/150 - (30%)
Similarity:77/150 - (51%) Gaps:25/150 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LLVLLVVSYC---VGGAYLFQHLERPHELEVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANV 104
            ||...:|:|.   ..||.|...||||||..::.::..||..|             ||.|..:|  
  Rat     6 LLASALVAYAGYLALGALLVARLERPHEARLRAELGTLREQL-------------LRHSPCVA-- 55

  Fly   105 SKHLANFEKQILT------AIKADGWDGDEDLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWG 163
            :..|..|.:::|.      |:.|:. .|..:.....|.||.:||::..::||:|||:.:|.||.|
  Rat    56 AHALDAFVERVLAAGRLGRAVLANA-SGPANASDPAWDFASALFFASTLVTTVGYGYTTPLTDAG 119

  Fly   164 KVTTIFYAIVGIPLMLICLS 183
            |..:|.:|::|:|:.::.|:
  Rat   120 KAFSIVFALLGVPITMLLLT 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 20/49 (41%)
NESP55 341..586 CDD:115071
Ion_trans <621..709 CDD:278921
Ion_trans_2 626..706 CDD:285168
Kcnk6NP_446258.2 Ion_trans_2 <91..146 CDD:400301 20/48 (42%)
Ion_trans_2 180..259 CDD:400301
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10303
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4566
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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