DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and Kcnk4

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_006230696.1 Gene:Kcnk4 / 116489 RGDID:621449 Length:423 Species:Rattus norvegicus


Alignment Length:211 Identity:68/211 - (32%)
Similarity:102/211 - (48%) Gaps:44/211 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QSLPAHMLEP---AKPQRGRCVAAICFSWKVLTCIVSHVLLVLLVVSYCVGGAYLFQHLERPHEL 68
            |.|||...:.   |.|..||.:.:        |.:::.:.||||   |.|.||.:||.||:|||.
  Rat     6 QELPAPPSQAGSGAGPAPGRAMRS--------TTLLALLALVLL---YLVSGALVFQALEQPHEQ 59

  Fly    69 EVKRDIQNLRVNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAI-----KADGWDGDE 128
            :|::|:::.|..      .|.|...|.:         |:|..|.|.:..|:     ....|....
  Rat    60 QVQKDLEDGRDQ------FLKDHPCVSQ---------KNLEGFIKLVAEALGGGANPETSWTNSS 109

  Fly   129 DLRKSQWTFAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSF 193
            : ..|.|....:.|:|..:|||||||:|:..||.|::..||||:|||||..:.|:.:||.:.:|.
  Rat   110 N-HSSAWNLGSAFFFSGTIITTIGYGNIALHTDAGRLFCIFYALVGIPLFGMLLAGVGDRLGSSL 173

  Fly   194 R---------FLYWRI 200
            |         ||.|.:
  Rat   174 RRGIGHIEAVFLKWHV 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 29/78 (37%)
Ion_trans_2 626..706 CDD:462301
Kcnk4XP_006230696.1 Ion_trans_2 <111..169 CDD:462301 27/57 (47%)
Ion_trans_2 207..285 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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