DRSC/TRiP Functional Genomics Resources

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Protein Alignment galene and kcnk13

DIOPT Version :10

Sequence 1:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_002933246.1 Gene:kcnk13 / 100485106 XenbaseID:XB-GENE-983023 Length:409 Species:Xenopus tropicalis


Alignment Length:179 Identity:43/179 - (24%)
Similarity:75/179 - (41%) Gaps:56/179 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RGRCVAAICFSWKVLTCIVSHV--------LLVLLVVSYCVGGAYLFQHLERPHELEVKR----- 72
            ||.|    |       |...|:        ||.:|::.|.:.||.:|..:|:|.|.|.|.     
 Frog     4 RGCC----C-------CGFGHINEDNGRFLLLAILIILYLLCGAAVFSAIEQPKEKEAKERWQQK 57

  Fly    73 -DIQNLRVNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKADGWDGDEDLRKSQWT 136
             |..:.:.||.                  ::::...|.::|:..:..|:.|.       .:.:|.
 Frog    58 FDTFSQKYNLN------------------VSDLRNFLRDYEEANVAGIRVDS-------IRPRWD 97

  Fly   137 FAGSLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNI 185
            |.|:.::...|::|||:|..:|.|..||:..|||.::|      |.:.|
 Frog    98 FTGAFYFVGTVVSTIGFGMTTPATIAGKIFLIFYGLIG------CAATI 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
galeneNP_612084.1 Ion_trans_2 115..189 CDD:462301 20/71 (28%)
Ion_trans_2 626..706 CDD:462301
kcnk13XP_002933246.1 Ion_trans_2 <94..151 CDD:462301 18/53 (34%)
Ion_trans_2 213..286 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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