DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mwh and Frl

DIOPT Version :9

Sequence 1:NP_001261244.1 Gene:mwh / 38131 FlyBaseID:FBgn0264272 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_729954.2 Gene:Frl / 39561 FlyBaseID:FBgn0267795 Length:1183 Species:Drosophila melanogaster


Alignment Length:915 Identity:170/915 - (18%)
Similarity:283/915 - (30%) Gaps:336/915 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 NGSLAS---------YKIGGSEQ-SWPQAPVYSKENQRP-PVYNPEDYVHSLRKFIKASGS---- 322
            |||::|         |.||.|.| ...:.|.....:|:| |..:..|     |:|.|...|    
  Fly    39 NGSISSGTLQKQDLRYDIGCSSQYQHVRQPSLRSRSQQPMPTTDELD-----RRFAKVLASMDLP 98

  Fly   323 ---AKKLSIYDVFTGPSPK-----EEASRSATLPAKHSEYKSPIPAPPENDREMSLRQF------ 373
               ||.|..||    ...|     ::....|..|..|...|......|:..|...|..|      
  Fly    99 PDKAKLLRNYD----DEKKWDMICDQEMVQAKDPPSHYLSKLRTYLDPKASRSHRLYLFYFLCQK 159

  Fly   374 ------GSITDLLTKLRADLRVSFPSFVQEFVGTPADGISHL-------LEVLRAIQMAQA---- 421
                  .:.|.:|..|...||.:...:|:||:.....|:..|       |:::|..|..|.    
  Fly   160 RKMVGESTSTQVLRDLEISLRTNHIEWVKEFLDDTNQGLDALVDYLSFRLQMMRHEQRLQGVLCA 224

  Fly   422 ------------------SNAPAPMPGASSSLAMNRN---------------------------- 440
                              .|:.:..||....|..:.|                            
  Fly   225 SEERLNLTNGGDGGEIVMGNSSSVSPGGGGGLLSHGNSTGHGLANGTLDSRQQHTMSYGFLRPTI 289

  Fly   441 -----PQSYQRR----------ALLDELSCLQCLSICCSRSLDAIARLGNTPVG----------L 480
                 ..|.:||          |..|::.    :||.|.|:      :.|...|          :
  Fly   290 ADALDSPSLKRRSRHIAKLNMGAATDDIH----VSIMCLRA------IMNNKYGFNMVIQHREAI 344

  Fly   481 MPLASSATGQGIRARILALQLLASACDRQPFGSGSGGQKIASAGHTAVSDAMSTLRLRCSEPVRF 545
            ..:|.|...:.:|.:.|.|:|||:.|             :...||..:..:....:..|.|..||
  Fly   345 NCIALSLIHKSLRTKALVLELLAAIC-------------LVKGGHEIILGSFDNFKDVCQEKRRF 396

  Fly   546 RLLVG-ILNSGGGSGELQCAGVKFLNTFIESAVSIQQRLYIQAELFQAGLDASTLARTISSSSPW 609
            :.|:. .:|....:.:...|.::|:|..:.|...:..|:::|.|....|||            .:
  Fly   397 QTLMEYFMNFEAFNIDFMVACMQFMNIVVHSVEDMNYRVHLQYEFTALGLD------------KY 449

  Fly   610 LDALKIEVKRFNELHIDVDQMITRARDAERVRSQMVILERRVQILHEEKAVLTSMERRLQERCAE 674
            |:  :|.:....||.:.:...:....|              |..|.|:....||...|:||...:
  Fly   450 LE--RIRLTESEELKVQISAYLDNVFD--------------VAALMEDSETKTSALERVQELEDQ 498

  Fly   675 LQREIFRLQGTQQQSKFKPVESSHQPVALPRQVPPPKKNKQNSSEHEDEGISSSETGASLSPVPI 739
            |:|||.|      .|:|                      ....:|.|.|.::             
  Fly   499 LEREIDR------NSEF----------------------LYKYAELESESLT------------- 522

  Fly   740 LILPSKAKPSRKVVEEDEDDAATIEDVIEE----LDNIVSEAEKQISSQTSSVTRPKMRHHRPVE 800
                         ::.:.:..|.|...:||    :..::...|:::..      |..:.|.:.:|
  Fly   523 -------------LKTEREQLAMIRQKLEEELTVMQRMLQHNEQELKK------RDTLLHTKNME 568

  Fly   801 KEIVPVNIVPQPPRKSRSLAHLVPRTDCSDQEGS--DYGMVLHQPADPDAAERLAAMQSFFDEVD 863
            .:.:           ||||    ||: .|..:||  :.|::                        
  Fly   569 LQTL-----------SRSL----PRS-ASSGDGSLANGGLM------------------------ 593

  Fly   864 YDAPETDQPAAYQMESPTPDMPEANATATAYNASTNRELLDVIMNARHDDHDPTMQALRKSVQDA 928
              |..|...|:..:..|.|.|| |:.||:               :|......|............
  Fly   594 --AGSTSGAASLTLPPPPPPMP-ASPTAS---------------SAAPPPPPPPAPPAPPPPPGF 640

  Fly   929 APVTIPHHPVKVKAPAPP----------PPTPPAQQF----NGVFFMTGMNTPQKYPKPDIS-AA 978
            :|:..|...:...||:||          ||.||...|    :|...:. ...|.||..|.:: .|
  Fly   641 SPLGSPSGSLASTAPSPPHAPPMLSSFQPPPPPVAGFMPAPDGAMTIK-RKVPTKYKLPTLNWIA 704

  Fly   979 LQARRVTKNV---------------ERLEAAFASAHPEALNEAAIGRE---KSRSNQQIYFTSNL 1025
            |:..:|...:               ...|..|......||...:.|.|   ..:|:::.....|:
  Fly   705 LKPNQVRGTIFNELDDEKIFKQIDFNEFEERFKIGIGGALRNGSNGTEVDGSLQSSKRFKRPDNV 769

  Fly  1026 AMRMH 1030
            ::..|
  Fly   770 SLLEH 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mwhNP_001261244.1 Drf_GBD <380..506 CDD:283920 37/207 (18%)
Drf_FH3 524..725 CDD:283917 41/201 (20%)
FrlNP_729954.2 Drf_GBD 77..371 CDD:283920 60/325 (18%)
Drf_FH3 374..567 CDD:283917 48/280 (17%)
FH2 687..1063 CDD:280362 16/89 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1923
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3972
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.860

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