DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mwh and fmnl1b

DIOPT Version :9

Sequence 1:NP_001261244.1 Gene:mwh / 38131 FlyBaseID:FBgn0264272 Length:1069 Species:Drosophila melanogaster
Sequence 2:XP_009295890.3 Gene:fmnl1b / 100536330 ZFINID:ZDB-GENE-130306-1 Length:1026 Species:Danio rerio


Alignment Length:846 Identity:169/846 - (19%)
Similarity:282/846 - (33%) Gaps:260/846 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 LEMAPSVCE----MAGQGQSGPVPPQKASGSNSS-KGTNKCGASSLN------GSLASYKIGGSE 285
            |||:| |.|    ::..||..|..|:....|... :.......:|:|      ..|:.|   .||
Zfish     8 LEMSP-VREIKRPLSTYGQKPPAAPKLPQPSEEELEERFSIVLNSMNLPPDKVMLLSQY---DSE 68

  Fly   286 QSWPQAPVYSKENQRPPVYNPED-YVHSLRKFIKASGSAKKLSIYDVFTGPSPKEEASRSATLPA 349
            :.|...    .:.:|..|.||.. |:..|:..::..|..|                         
Zfish    69 KKWELV----CDQERFQVKNPPSAYIQKLKSVLEQGGGRK------------------------- 104

  Fly   350 KHSEYKSPIPAPPENDREMSLRQFGSITDLLTKLRADLRVSFPSFVQEFVGTPADGISHLLEVLR 414
                :|               |:....|.:|.:|...||.:...:.:||:....:|:..|::.|.
Zfish   105 ----FK---------------RRVQESTQVLRELEISLRTNHIGWAEEFLNEENNGLDVLVDYLS 150

  Fly   415 AIQMA------------------------QASNAPAPMPGASSSLAMNRNPQSYQRRALLDELSC 455
            ..|.|                        .|:|:|......|:.....|....|.|  :|.:.:.
Zfish   151 FAQRAVIYDMDSSSENGSFEEKSVEDLTTSATNSPTHNSPRSARPFTTRKALRYSR--MLSQNNH 213

  Fly   456 LQCLSICCSRSLDAIARLGNTPVGLMP-----LASSATGQGIRARILALQLLASACDRQPFGSGS 515
            |. |.|.|.|:: ...:||...|...|     :..|...:..|.:.|.|:|||:.|         
Zfish   214 LH-LCIMCLRAI-MNYQLGFNQVTAHPSCVNEITLSLNNRSARTKALVLELLAAVC--------- 267

  Fly   516 GGQKIASAGHTAVSDAMSTLRLRCSEPVRFRLLVGILNSGGGSGELQCAGVKFLNTFIESAVSIQ 580
                :...||..:..|.:..|..|.|..||..|:....:...:.:...|.::|:|..:.|...:.
Zfish   268 ----LVRGGHEMILAAFNNFREVCGEKNRFEKLMEYFRNEESNIDFMVACMQFINIVVHSVEDMN 328

  Fly   581 QRLYIQAELFQAGLDASTLARTISSSSPWLDALKIEVKRFNELHIDVDQMITRARDAERVRSQMV 645
            .|:::|.|..|.|||:......::.|    :.|:|:::.:.:...||..|:   .|||...:.|.
Zfish   329 FRVFLQYEFTQLGLDSYLEKLNMTES----ERLQIQIQAYLDNVFDVGAML---EDAEAKNTLME 386

  Fly   646 ILERRVQILHEEKAVLTSMERRLQERCAELQREIFRLQGT---QQQSKFKPVESSHQPVALPRQV 707
            .||.    |.|:.   |.:..||.      |.||..|:.|   :||.    ::||.|...|...|
Zfish   387 HLEE----LQEQN---TQLNTRLH------QCEIEALEKTTDLEQQL----IQSSKQVELLKESV 434

  Fly   708 PPPKKNKQNSSEHEDEGISSSETGASLSPVPILILPSKAKPSRKVVEEDEDDAATIEDVIEELDN 772
                         ::..:|||...:           |..:..|:.|..:                
Zfish   435 -------------KEVRLSSSSFSS-----------SSRRTDRRAVRPN---------------- 459

  Fly   773 IVSEAEKQISSQTSSVTRPKMRHHR---PVEKEIVPVNIVPQPPRKSRSLA-----HLVPRTDCS 829
                     |:.|.:.:|.:.|..|   .||:.::         |..||.:     |::...:.:
Zfish   460 ---------STHTQTDSRRRCRWRRCQLLVERGLI---------RMERSASGALDLHIIAAANTT 506

  Fly   830 DQEGSDYGMVLHQPADPDAAERLAAMQSFFDEVDYDAPETDQPAAYQMESPTPDMPEANATATA- 893
            |:...:...|...|..|..                .||....|......:| |..|....|.|. 
Zfish   507 DKCSKETSPVPQSPPPPPV----------------PAPPPPPPPPPLALAP-PTSPFIGRTGTIK 554

  Fly   894 -------------------YNASTNRELLDVIMNARHDD------HDPTMQALRKSVQDAAPVTI 933
                               :.|....::...:.....|.      :....:.|.|:...:|||.:
Zfish   555 TGVKGKQPIKTKYRMPLLNWQALMEEQVAGTVFTELDDQTVLQELNMDVFEELFKTKAQSAPVDV 619

  Fly   934 PHHPVKV--KAPAPPPPTPPAQQFNGVFFM--TGMNTPQKYPKPDISAALQARRVTKNVERLEAA 994
            ....|||  ||.:......|.:..|....:  .||:|.|      |..|:|    |.|:|.|::.
Zfish   620 GTLKVKVAQKASSKISLLEPNRAKNLAITLRKAGMSTAQ------ICTAIQ----TYNLELLKSD 674

  Fly   995 F 995
            |
Zfish   675 F 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mwhNP_001261244.1 Drf_GBD <380..506 CDD:283920 35/154 (23%)
Drf_FH3 524..725 CDD:283917 49/203 (24%)
fmnl1bXP_009295890.3 Drf_GBD 33..268 CDD:310750 55/302 (18%)
Drf_FH3 271..437 CDD:310747 49/202 (24%)
FH2 559..925 CDD:280362 26/127 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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