DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and 9530003J23Rik

DIOPT Version :9

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_084182.2 Gene:9530003J23Rik / 77397 MGIID:1924647 Length:151 Species:Mus musculus


Alignment Length:126 Identity:52/126 - (41%)
Similarity:73/126 - (57%) Gaps:10/126 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVLLAIAAPALAGRTLDRCSLAREMADLGVPRDQ---LDKWTCIAQHESDYRTWVVGPANSDGSN 68
            |:||:|   .:.|:..|||||||.:..||:...|   |..|.|:|:.||::.|........|.|.
Mouse    12 LLLLSI---TIQGKVYDRCSLARTLQSLGLAGFQGITLANWVCLAKWESNFNTNTTRFNPEDQST 73

  Fly    69 DYGIFQINDLYWCQADGRF--SYNECGLSCNALLTDDITNSVRCAQKVLSQ-QGWSAWAVW 126
            .|||||||..:||. ||:.  |.|.|.:||.|||..:|.::|.||::::.. ||..:||.|
Mouse    74 SYGIFQINSRFWCN-DGKTPGSRNFCRISCKALLKSNIWSAVVCAKRIVKDPQGIYSWAGW 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ1 20..140 CDD:197612 47/113 (42%)
9530003J23RikNP_084182.2 LYZ1 22..147 CDD:238066 47/113 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844171
Domainoid 1 1.000 108 1.000 Domainoid score I6421
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4836
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8677
orthoMCL 1 0.900 - - OOG6_107030
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.810

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