DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and Spaca3

DIOPT Version :9

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001346112.1 Gene:Spaca3 / 75622 MGIID:1922872 Length:163 Species:Mus musculus


Alignment Length:139 Identity:45/139 - (32%)
Similarity:68/139 - (48%) Gaps:11/139 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAIAAPALAGRTLDRCSLAREMADLGVPRDQ---LDKWTCIAQHESDYRTWVVGPANSDGSNDY 70
            ||:....:...:...||.||:||.|.|:...:   |..|.|:|.:.|.:.|..| ...:|||.:.
Mouse    25 LLSCLLASSKAKVFSRCELAKEMHDFGLDGYRGYNLADWVCLAYYTSGFNTNAV-DHEADGSTNN 88

  Fly    71 GIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQQ-GWSAWAVW-HYCSG-- 131
            |||||:...||:.......|.|.:.|..||.:|:.:|:.||.|::.:. |...|..| |:|.|  
Mouse    89 GIFQISSRRWCRTLASNGPNLCRIYCTDLLNNDLKDSIVCAMKIVQEPLGLGYWEAWRHHCQGRD 153

  Fly   132 ---WLPSID 137
               |:...|
Mouse   154 LSDWVDGCD 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ1 20..140 CDD:197612 43/128 (34%)
Spaca3NP_001346112.1 LYZ1 36..159 CDD:238066 42/123 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844205
Domainoid 1 1.000 108 1.000 Domainoid score I6421
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4836
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8677
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.900

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