DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and spaca5

DIOPT Version :9

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001011312.1 Gene:spaca5 / 496769 XenbaseID:XB-GENE-923467 Length:140 Species:Xenopus tropicalis


Alignment Length:138 Identity:51/138 - (36%)
Similarity:72/138 - (52%) Gaps:15/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFFALVLLAIAAPALAGRTLDRCSLAREMAD---LGVPRDQLDKWTCIAQHESDYRTWVVGPA 62
            ||.|  ::|:..||.|.....|||||:.|.:.:   :|:....|..:.|:|...|.|.|     :
 Frog     1 MKIF--VLLMITAAFAAHSWALDRCSVVRAIRNGGVIGIKGYTLGDYVCLAYQASRYDT-----S 58

  Fly    63 NSDGSNDYGIFQINDLYWCQADGRF--SYNECGLSCNALLTDDITNSVRCAQKVL-SQQGWSAWA 124
            .:....:|||||||..:||. |||.  ..|.||:||..||...|.:.|||.:::: ...|..||:
 Frog    59 LNRSPTEYGIFQINSYWWCN-DGRTVGRKNLCGMSCTNLLNSYIDDDVRCLKRIVRDPNGLGAWS 122

  Fly   125 VW-HYCSG 131
            || .||.|
 Frog   123 VWTRYCKG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ1 20..140 CDD:197612 44/119 (37%)
spaca5NP_001011312.1 LYZ_C 20..140 CDD:340383 44/117 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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