DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysS and LOC4576725

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_001237086.2 Gene:LOC4576725 / 4576725 VectorBaseID:AGAMI1_006331 Length:155 Species:Anopheles gambiae


Alignment Length:142 Identity:64/142 - (45%)
Similarity:83/142 - (58%) Gaps:4/142 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFFALVLLAIAAPALAGRTLDRCSLAREMADLGVPRDQLDKWTCIAQHESDYRTWVVGPANSD 65
            ||.||..:|||:..... |:...:|.|.|.:|..|.||.||..|.|:.|:||.|.|......|.|
Mosquito    12 MKLFFVTILLAVLGTTY-GKVFTKCELVRLLAANGFPRSQLPDWICLIQNESRYDTSAWNTKNRD 75

  Fly    66 GSNDYGIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQQGWSAWAVW-HYC 129
            ||.||||||||:.||| |:|:...|||.|.|::|..|||.:.:|||..:..:..::||..| ..|
Mosquito    76 GSKDYGIFQINNYYWC-AEGKVGANECKLQCSSLRDDDIGDDMRCALFIYRRHQFNAWNAWKDKC 139

  Fly   130 SGW-LPSIDECF 140
            .|. .||:||||
Mosquito   140 RGKPKPSVDECF 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 53/120 (44%)
LOC4576725XP_001237086.2 None

Return to query results.
Submit another query.