DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and CG8492

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_648151.2 Gene:CG8492 / 38866 FlyBaseID:FBgn0035813 Length:1360 Species:Drosophila melanogaster


Alignment Length:141 Identity:51/141 - (36%)
Similarity:81/141 - (57%) Gaps:10/141 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAIAAPALAGRTLDRCSLAREMADL-GVPRDQLDKWTCIAQHESDYRTWVVGPANSDGSNDYGI 72
            |:...:|....:..:||.||:|:... ..|..::..|.|||:|||.:.|..||..|:|||.|:|:
  Fly   585 LVKKTSPTPKAKIYNRCELAKELYHRHKFPMREIPTWVCIAEHESSFNTAAVGKLNADGSEDHGL 649

  Fly    73 FQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKV------LSQQGWSAWAVWH-YCS 130
            |||:|:|||..| :.|...|.:.|:.||..||::.|:|.:.:      ||..|::||.|:: :|.
  Fly   650 FQISDIYWCTHD-QTSGKACHIECDRLLDSDISDDVQCIRTIHEEHTRLSGDGFNAWTVYNGHCR 713

  Fly   131 GW-LPSIDECF 140
            .. |..:.:||
  Fly   714 NQNLAKLSDCF 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 47/127 (37%)
CG8492NP_648151.2 LYZ_C_invert 18..144 CDD:381618
LYZ_C_invert 185..301 CDD:381618
LYZ_C_invert 439..566 CDD:381618
LYZ_C_invert 596..723 CDD:381618 47/127 (37%)
Herpes_BLLF1 <823..1261 CDD:282904
PHA03255 937..>1067 CDD:165513
Blue background indicates that the domain is not in the aligned region.

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