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Protein Alignment LysS and Spaca3
DIOPT Version :9
Sequence 1: | NP_476829.1 |
Gene: | LysS / 38130 |
FlyBaseID: | FBgn0004430 |
Length: | 140 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099290.1 |
Gene: | Spaca3 / 287557 |
RGDID: | 1306684 |
Length: | 163 |
Species: | Rattus norvegicus |
Alignment Length: | 141 |
Identity: | 45/141 - (31%) |
Similarity: | 68/141 - (48%) |
Gaps: | 14/141 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LLAIAAPALAGRTLDRCSLAREMADLGVPRDQ---LDKWTCIAQHESDYRTWVVGPANSDGSNDY 70
||:....:...:...||.||:.:.|.|:...: |..|.|:|.:.|.:.|..| ...:|||.:.
Rat 25 LLSCLLASSKAKVFSRCELAKVLHDFGLEGYRGYNLADWICLAYYTSGFNTDAV-DHEADGSTNN 88
Fly 71 GIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQ-QGWSAWAVW-HYCSG-- 131
|||||:...||:.......|.|.:.|..||::|:.:||.|..|:..: ||...|..| |:|.|
Rat 89 GIFQISSRKWCKNLAPNGPNLCRIYCTDLLSNDLKDSVACVMKIAQEPQGLGYWESWKHHCQGRD 153
Fly 132 ---WLPSIDEC 139
| :|.|
Rat 154 LSDW---VDGC 161
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LysS | NP_476829.1 |
LYZ1 |
20..140 |
CDD:197612 |
43/130 (33%) |
Spaca3 | NP_001099290.1 |
LYZ_C |
36..161 |
CDD:340383 |
42/128 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166347569 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2BPI7 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1551203at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm8912 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11407 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X173 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.850 |
|
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