DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and Spaca5

DIOPT Version :9

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001078862.1 Gene:Spaca5 / 278203 MGIID:2685564 Length:160 Species:Mus musculus


Alignment Length:140 Identity:46/140 - (32%)
Similarity:75/140 - (53%) Gaps:16/140 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVLLAIAAPA-LAGRTLDRCSLAREMADLGVPRDQ---LDKWTCIAQHESDYRTWVVGPANSDGS 67
            :|:||:...| |..:..:||.||:::.:.|:...:   :..|.|:|.:||.:.|..| ..|.|||
Mouse     8 VVILAVLLIAKLDAKIYERCELAKKLEEAGLDGFKGYTVGDWLCVAHYESGFDTSFV-DHNPDGS 71

  Fly    68 NDYGIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVL----SQQGWSAWAVWHY 128
            ::|||||:|..:||......:.|.|.:.||.||...|.:.:.||::|.    |.:.|.:|.  .:
Mouse    72 SEYGIFQLNSAWWCNNGITPTQNLCNIDCNDLLNRHILDDIICAKRVASSHKSMKAWDSWT--QH 134

  Fly   129 CSG-----WL 133
            |:|     ||
Mouse   135 CAGHDLSEWL 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ1 20..140 CDD:197612 41/126 (33%)
Spaca5NP_001078862.1 LYZ1 22..145 CDD:238066 41/126 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844213
Domainoid 1 1.000 108 1.000 Domainoid score I6421
eggNOG 1 0.900 - - E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4836
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8677
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.910

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