DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and CG30062

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_725299.2 Gene:CG30062 / 246428 FlyBaseID:FBgn0050062 Length:171 Species:Drosophila melanogaster


Alignment Length:141 Identity:65/141 - (46%)
Similarity:92/141 - (65%) Gaps:12/141 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FFALVLLAIAAPALAGRTLDRCSLAREMADLGVPRDQLDKWTCIAQHESDYRTWVVGPANSDGSN 68
            |..:.||||        .|..|.||.::..|.||:.:|..|.|||:.||.:.|.|||.||:|||.
  Fly    19 FHGIPLLAI--------RLQPCELAGQLYILDVPKSELPLWLCIAEFESRFNTHVVGQANADGSR 75

  Fly    69 DYGIFQINDLYWCQADGR---FSYNECGLSCNALLTDDITNSVRCAQKVLSQQGWSAWAVW-HYC 129
            |||:|||:|.|||....|   :::|:|.::|..||:||||.:|:||:.:..||||:||:|: .:|
  Fly    76 DYGLFQISDRYWCAPPNRTEYYAFNDCNVNCTHLLSDDITMAVQCARLIQKQQGWTAWSVYPEFC 140

  Fly   130 SGWLPSIDECF 140
            :|.|.:||.||
  Fly   141 NGTLDAIDVCF 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 58/122 (48%)
CG30062NP_725299.2 LYZ_C_invert 29..150 CDD:381618 58/120 (48%)

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