DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and Lyz1

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_038618.1 Gene:Lyz1 / 17110 MGIID:96902 Length:148 Species:Mus musculus


Alignment Length:134 Identity:60/134 - (44%)
Similarity:79/134 - (58%) Gaps:12/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFFALVLLAIAAPALAGRTLDRCSLAREMADLGVPRD-----QLDKWTCIAQHESDYRTWVVG 60
            |||...|.||.::..|.| :..:||.|||.:...|:  |     :|..|.|:|||||:|.|....
Mouse     1 MKALLTLGLLLLSVTAQA-KVYNRCELARILKRNGM--DGYRGVKLADWVCLAQHESNYNTRATN 62

  Fly    61 PANSDGSNDYGIFQINDLYWCQADGRF--SYNECGLSCNALLTDDITNSVRCAQKVL-SQQGWSA 122
            ....|.|.||||||||..|||. ||:.  |.|.||::|:|||.||||.:::||::|: ..||..|
Mouse    63 YNRGDRSTDYGIFQINSRYWCN-DGKTPRSKNACGINCSALLQDDITAAIQCAKRVVRDPQGIRA 126

  Fly   123 WAVW 126
            |..|
Mouse   127 WVAW 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 52/115 (45%)
Lyz1NP_038618.1 LYZ1 19..147 CDD:197612 52/115 (45%)

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