DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LysS and LOC1269831

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_308481.1 Gene:LOC1269831 / 1269831 VectorBaseID:AGAMI1_013470 Length:140 Species:Anopheles gambiae


Alignment Length:143 Identity:56/143 - (39%)
Similarity:89/143 - (62%) Gaps:6/143 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFFALVLLAIAAPALA-GRTLDRCSLAREMADLGVPRDQLDKWTCIAQHESDYRTWVVGPANS 64
            ||.|..::|..:|..|:| .:|..:|.||:.:|:.|:.:..|..|.|:.|:||.:.|.... .|.
Mosquito     1 MKVFSTVLLAIVACCAVAEAKTFGKCELAKALANNGIAKASLPDWVCLVQNESAFSTSATN-KNK 64

  Fly    65 DGSNDYGIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQQGWSAWAVW-HY 128
            :||.||||||||:.|||  |..:..|:|.::|..||.||||:.::||:.:..:.|::||..| ::
Mosquito    65 NGSTDYGIFQINNKYWC--DSGYGSNDCKIACKNLLNDDITDDIKCAKLIHKRHGFNAWYGWKNH 127

  Fly   129 CSG-WLPSIDECF 140
            |:| .||::..||
Mosquito   128 CNGKKLPNVSSCF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 47/120 (39%)
LOC1269831XP_308481.1 LYZ_C_invert 21..139 CDD:381618 47/120 (39%)

Return to query results.
Submit another query.