DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and SPACA3

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_776246.1 Gene:SPACA3 / 124912 HGNCID:16260 Length:215 Species:Homo sapiens


Alignment Length:145 Identity:48/145 - (33%)
Similarity:69/145 - (47%) Gaps:15/145 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALV-LLAIAAPALAGRTLDRCSLAREMADLGVPRDQ---LDKWTCIAQHESDYRTWVVGPANSDG 66
            ||| ||:...|:...:...||.|||.:.|.|:...:   |..|.|:|...|.:....: ...:||
Human    73 ALVCLLSCLLPSSEAKLYGRCELARVLHDFGLDGYRGYSLADWVCLAYFTSGFNAAAL-DYEADG 136

  Fly    67 SNDYGIFQINDLYWCQADGRFSYNECGLSCNALLTDDITNSVRCAQKVLSQ-QGWSAWAVW-HYC 129
            |.:.||||||...||........|.|.:.|:.||..::.::|.||.|:..: ||...|..| |:|
Human   137 STNNGIFQINSRRWCSNLTPNVPNVCRMYCSDLLNPNLKDTVICAMKITQEPQGLGYWEAWRHHC 201

  Fly   130 SG-----WLPSIDEC 139
            .|     |   :|.|
Human   202 QGKDLTEW---VDGC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 41/128 (32%)
SPACA3NP_776246.1 LYZ_C 88..213 CDD:340383 41/128 (32%)

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