DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysS and spaca5l

DIOPT Version :10

Sequence 1:NP_476829.1 Gene:LysS / 38130 FlyBaseID:FBgn0004430 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_031748221.1 Gene:spaca5l / 116407060 XenbaseID:XB-GENE-29092563 Length:146 Species:Xenopus tropicalis


Alignment Length:148 Identity:51/148 - (34%)
Similarity:73/148 - (49%) Gaps:35/148 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFFALVLLAIAAPALAG---RTLDRCSLAREMADLGVPRD-----QLDKWTCIAQHESDYRT- 56
            ||:....:|.|.    |||   :...:|.||:.:...|:  |     .|..|.|::.:||.|.| 
 Frog     1 MKSLLCAILFAF----LAGTDAKVFAKCDLAKVLKAGGL--DGYYGYSLANWMCLSYYESRYTTN 59

  Fly    57 ------WVVGPANSDGSNDYGIFQINDLYWCQADGRFS--YNECGLSCNALLTDDITNSVRCAQK 113
                  |         |.|||:||||..:||. ||:.|  ...||:||:.|:.||||:.:.||::
 Frog    60 AMYDNGW---------SRDYGVFQINSYWWCN-DGKTSGAVAACGISCSNLMNDDITDDITCAKR 114

  Fly   114 VL-SQQGWSAWAVW-HYC 129
            |: ...|..||..| :||
 Frog   115 VVRDPNGMGAWVAWNNYC 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysSNP_476829.1 LYZ_C_invert 20..139 CDD:381618 44/126 (35%)
spaca5lXP_031748221.1 LYZ_C 19..144 CDD:340383 44/126 (35%)

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