DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and Spaca3

DIOPT Version :10

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_083643.1 Gene:Spaca3 / 75622 MGIID:1922872 Length:163 Species:Mus musculus


Alignment Length:137 Identity:48/137 - (35%)
Similarity:75/137 - (54%) Gaps:15/137 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQ---LAKWTCIAQHESSFRTGVVGPANS 64
            |:|:.|.|    .:::|:...||.||:||...|:...:   ||.|.|:|.:.|.|.|..| ...:
Mouse    23 AYLLSCLL----ASSKAKVFSRCELAKEMHDFGLDGYRGYNLADWVCLAYYTSGFNTNAV-DHEA 82

  Fly    65 NGSNDYGIFQINNKYWCK--PADGRFSYNECGLSCNALLTDDITNSVKCARKI-QRQQGWTAWST 126
            :||.:.|||||:::.||:  .::|.   |.|.:.|..||.:|:.:|:.||.|| |...|...|..
Mouse    83 DGSTNNGIFQISSRRWCRTLASNGP---NLCRIYCTDLLNNDLKDSIVCAMKIVQEPLGLGYWEA 144

  Fly   127 WK-YCSG 132
            |: :|.|
Mouse   145 WRHHCQG 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ_C_invert 20..140 CDD:381618 43/120 (36%)
Spaca3NP_083643.1 LYZ_C 36..161 CDD:340383 43/120 (36%)

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