DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and lyz

DIOPT Version :9

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_631919.1 Gene:lyz / 677744 ZFINID:ZDB-GENE-020515-2 Length:151 Species:Danio rerio


Alignment Length:145 Identity:47/145 - (32%)
Similarity:75/145 - (51%) Gaps:13/145 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQ---LAKWTCIAQHESSFRTGVVGPANS 64
            |.:.:|...::  :.:::|:.||.:.:.....|:...:   :..:.|.|..||.|:|..|..|::
Zfish     4 AVVFLCLAWMS--SCESKTLGRCDVYKIFKNEGLDGFEGFSIGNYVCTAYWESRFKTHRVRSADT 66

  Fly    65 NGSNDYGIFQINNKYWCKPADGR-FSYNECGLSCNALLTDDITNSVKCARKIQRQQGWTAWSTW- 127
              ..||||||||:..||.  ||. ...|.|.::|:.||.||:..||.||:.|.:..|..:|.|| 
Zfish    67 --GKDYGIFQINSFKWCD--DGTPGGKNLCKVACSDLLNDDLKASVGCAKLIVKMDGLKSWETWD 127

  Fly   128 KYCSGSLPS--INSC 140
            .||:|...|  :..|
Zfish   128 SYCNGRKMSRWVKGC 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ1 20..141 CDD:197612 45/128 (35%)
lyzNP_631919.1 LYZ1 19..140 CDD:238066 44/124 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589127
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D1551203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.960

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