DRSC/TRiP Functional Genomics Resources

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Protein Alignment LysP and LysD

DIOPT Version :9

Sequence 1:NP_476828.1 Gene:LysP / 38129 FlyBaseID:FBgn0004429 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster


Alignment Length:141 Identity:108/141 - (76%)
Similarity:120/141 - (85%) Gaps:1/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQLAKWTCIAQHESSFRTGVVGPANSN 65
            ||||:|:.||...|.|. .|||||||||||||.|||||||||:|.|||:||||:|||||||.|.|
  Fly     1 MKAFIVLVALACAAPAF-GRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYN 64

  Fly    66 GSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLTDDITNSVKCARKIQRQQGWTAWSTWKYC 130
            |||||||||||:.|||.|..|||||||||||||||||||||:||:||:|:..||||:|||||.||
  Fly    65 GSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTWHYC 129

  Fly   131 SGSLPSINSCF 141
            ||.||||:.||
  Fly   130 SGWLPSIDDCF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LysPNP_476828.1 LYZ1 20..141 CDD:197612 97/120 (81%)
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 97/119 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468982
Domainoid 1 1.000 111 1.000 Domainoid score I12139
eggNOG 1 0.900 - - E1_2BPI7
Homologene 1 1.000 - - H80675
Inparanoid 1 1.050 130 1.000 Inparanoid score I7030
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46733
OrthoDB 1 1.010 - - D116778at33392
OrthoFinder 1 1.000 - - FOG0004526
OrthoInspector 1 1.000 - - mtm8677
orthoMCL 1 0.900 - - OOG6_107030
Panther 1 1.100 - - P PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
1312.810

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